Taxonomy workbench. - Michael Wildpaner; Georg Schneider 001; Alexander Schleiffer; Frank Eisenhaber (Bioinform., 2001)

DOUTfinder - identification of distant domain outliers using subsignificant sequence similarity. - Maria Novatchkova; Georg Schneider 001; Richard Fritz; Frank Eisenhaber; Alexander Schleiffer (Nucleic Acids Res., 2006)

ANNIE: integrated de novo protein sequence annotation. - Hong Sain Ooi; Chia Yee Kwoh; Michael Wildpaner; Fernanda L. Sirota; Birgit Eisenhaber; Sebastian Maurer-Stroh; Wing-Cheong Wong; Alexander Schleiffer; Frank Eisenhaber; Georg Schneider 001 (Nucleic Acids Res., 2009)