Modeling Dynamics with Deep Transition-Learning Networks. - David van Dijk; Scott Gigante; Alexander Strzalkowski; Guy Wolf; Smita Krishnaswamy (CoRR, 2018)

Variance Minimization in the Wasserstein Space for Invariant Causal Prediction. - Guillaume G. Martinet; Alexander Strzalkowski; Barbara E. Engelhardt (AISTATS, 2022)

Inferring Cell Differentiation Maps from Lineage Tracing Data. - Palash Sashittal; Richard Y. Zhang; Benjamin K. Law; Henri Schmidt; Alexander Strzalkowski; Adriano Bolondi; Michelle M. Chan; Benjamin J. Raphael (RECOMB, 2025)