BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology. - Robert Hoehndorf; Joshua Bacher; Michael Backhaus; Sergio E. Gregorio Jr.; Frank Loebe; Kay Prüfer; Alexandr Uciteli; Johann Visagie; Heinrich Herre; Janet Kelso (BMC Bioinform., 2009)

An ontologically founded architecture for information systems in clinical and epidemiological research. - Alexandr Uciteli; Silvia Groß; Sergej Kireyev; Heinrich Herre (J. Biomed. Semant., 2011)

Search Ontology, a new approach towards Semantic Search. - Alexandr Uciteli; Christoph Goller; Patryk Burek; Sebastian Siemoleit; Breno Faria; Halyna Galanzina; Timo Weiland; Doreen Drechsler-Hake; Wolfram Bartussek; Heinrich Herre (GI-Jahrestagung, 2014)

Ontology-based retrieval of scientific data in LIFE. - Alexandr Uciteli; Toralf Kirsten (BTW Workshops, 2015)

OntoStudyEdit: a new approach for ontology-based representation and management of metadata in clinical and epidemiological research. - Alexandr Uciteli; Heinrich Herre (J. Biomed. Semant., 2015)

Querying standardized EHRs by a Search Ontology XML extension (SOX). - Stefan Kropf; Alexandr Uciteli; Peter Krücken; Kerstin Denecke; Heinrich Herre (ODLS, 2016)

Risk Identification Ontology (RIO): An ontology for specification and identification of perioperative risks. - Alexandr Uciteli; Juliane Neumann; Kais Tahar; Kutaiba Saleh; Stephan Stucke; Sebastian Faulbrück-Röhr; André Kaeding; Martin Specht; Tobias Schmidt 002; Thomas Neumuth; Andreas Besting; Frank Portheine; et al. (ODLS, 2016)

Light-Weighted Automatic Import of Standardized Ontologies into the Content Management System Drupal. - Christoph Beger; Alexandr Uciteli; Heinrich Herre (GMDS, 2017)

Processual Reasoning over Sequences of Situations in Endoscopic Surgery. - Sebastian Siemoleit; Alexandr Uciteli; Richard Bieck; Heinrich Herre (GMDS, 2017)

Ontological Modelling of Situational Awareness in Surgical Interventions. - Sebastian Siemoleit; Alexandr Uciteli; Richard Bieck; Heinrich Herre (JOWO, 2017)

Search Ontology Generator (SONG): Ontology-Based Specification and Generation of Search Queries. - Alexandr Uciteli; Stefan Kropf; Timo Weiland; Stefanie Meese; Klaus Graef; Sabrina Rohrer; Marc O. Schurr; Wolfram Bartussek; Christoph Goller; Philipp Blohm; Robin Seidel; Christian Bayer 003; et al. (JOWO, 2017)

Using Fast Healthcare Interoperability Resources (FHIR) for the Integration of Risk Minimization Systems in Hospitals. - Kutaiba Saleh; Stephan Stucke; Alexandr Uciteli; Sebastian Faulbrück-Röhr; Juliane Neumann; Kais Tahar; Danny Ammon; Tobias Schmidt 002; Thomas Neumuth; Andreas Besting; Frank Portheine; Heinrich Herre; et al. (MedInfo, 2017)

Ontology-based specification, identification and analysis of perioperative risks. - Alexandr Uciteli; Juliane Neumann; Kais Tahar; Kutaiba Saleh; Stephan Stucke; Sebastian Faulbrück-Röhr; André Kaeding; Martin Specht; Tobias Schmidt 002; Thomas Neumuth; Andreas Besting; Dominik Stegemann; et al. (J. Biomed. Semant., 2017)

Ontology-Based Modelling of Web Content: Example Leipzig Health Atlas. - Alexandr Uciteli; Christoph Beger; Katja Rillich; Frank A. Meineke; Markus Loeffler; Heinrich Herre (Semantic Applications, 2018)

Ontology-Guided Markerless Navigation and Situational Awareness for Endoscopic Surgery. - Kais Tahar; Alexandr Uciteli; Philip Röppischer; Heinrich Herre; Sebastian Siemoleit (GMDS, 2018)

Querying archetype-based EHRs by search ontology-based XPath engineering. - Stefan Kropf; Alexandr Uciteli; Katrin Schierle; Peter Krücken; Kerstin Denecke; Heinrich Herre (J. Biomed. Semant., 2018)

Ontologie-basierte Spezifikation, Repräsentation und Anwendung klinischer Metadaten. - Alexandr Uciteli (2018)

Design and Concept of the SMITH Phenotyping Pipeline. - Frank A. Meineke; Sebastian Stäubert; Matthias Löbe; Alexandr Uciteli; Markus Löffler (GMDS, 2019)

Spreadsheet Model Generator (SMOG): A Lightweight Tool for Object-Spreadsheet Mapping. - Alexandr Uciteli; Christoph Beger; Stefan Kropf; Heinrich Herre (GMDS, 2019)

Ontological Modelling and Reasoning of Phenotypes. - Alexandr Uciteli; Christoph Beger; Toralf Kirsten; Frank A. Meineke; Heinrich Herre (JOWO, 2019)

Ontology-based specification and generation of search queries for post-market surveillance. - Alexandr Uciteli; Stefan Kropf; Timo Weiland; Stefanie Meese; Klaus Graef; Sabrina Rohrer; Marc O. Schurr; Wolfram Bartussek; Christoph Goller; Philipp Blohm; Robin Seidel; Christian Bayer 003; et al. (J. Biomed. Semant., 2019)

Ontological Modelling and Execution of Phenotypic Queries in the Leipzig Health Atlas. - Alexandr Uciteli; Christoph Beger; Jonas Wagner; Alexander Kiel; Frank A. Meineke; Sebastian Stäubert; Matthias Löbe; René Hänsel; Judith Schuster; Toralf Kirsten; Heinrich Herre (GMDS, 2020)

Ontological representation, classification and data-driven computing of phenotypes. - Alexandr Uciteli; Christoph Beger; Toralf Kirsten; Frank A. Meineke; Heinrich Herre (J. Biomed. Semant., 2020)

Ontology-based surgical workflow recognition and prediction. - Juliane Neumann; Alexandr Uciteli; Tim Meschke; Richard Bieck; Stefan Franke; Heinrich Herre; Thomas Neumuth (J. Biomed. Informatics, 2022)

Modelling Adverse Events with the TOP Phenotyping Framework. - Christoph Beger; Anna Maria Boehmer; Beate Mussawy; Louisa Redeker; Franz Matthies; Ralph Schäfermeier; Annette Härdtlein; Tobias Dreischulte; Daniel Neumann; Alexandr Uciteli (GMDS, 2023)

Concept Graphs: A Novel Approach for Textual Analysis of Medical Documents. - Franz Matthies; Christoph Beger; Ralph Schäfermeier; Alexandr Uciteli (GMDS, 2023)

Extending the TOP Framework with an Ontology-Based Text Search Component. - Franz Matthies; Christoph Beger; Ralph Schäfermeier; Konrad Höffner; Alexandr Uciteli (GMDS, 2024)

Tracking Changes for Inter-Version Interoperability in Heterogeneous Evolving Medical Terminologies. - Ralph Schäfermeier; Christoph Beger; Franz Matthies; Konrad Hoeffner; Alexandr Uciteli (GMDS, 2024)

Ontologically Founded Design Patterns for Situation Modeling. - Patryk Burek; Frank Loebe; Ralph Schäfermeier; Alexandr Uciteli; Bartosz Kondracki; Heinrich Herre (ISD, 2024)