L1000FWD: fireworks visualization of drug-induced transcriptomic signatures. - Zichen Wang 002; Alexander Lachmann; Alexandra B. Keenan; Avi Ma'ayan (Bioinform., 2018)

eXpression2Kinases (X2K) Web: linking expression signatures to upstream cell signaling networks. - Daniel J. B. Clarke; Maxim V. Kuleshov; Brian M. Schilder; Denis Torre; Mary E. Duffy; Alexandra B. Keenan; Alexander Lachmann; Axel S. Feldmann; Gregory W. Gundersen; Moshe C. Silverstein; Zichen Wang 002; Avi Ma'ayan (Nucleic Acids Res., 2018)

ChEA3: transcription factor enrichment analysis by orthogonal omics integration. - Alexandra B. Keenan; Denis Torre; Alexander Lachmann; Ariel K. Leong; Megan L. Wojciechowicz; Vivian Utti; Kathleen M. Jagodnik; Eryk Kropiwnicki; Zichen Wang 002; Avi Ma'ayan (Nucleic Acids Res., 2019)

modEnrichr: a suite of gene set enrichment analysis tools for model organisms. - Maxim V. Kuleshov; Jennifer E. L. Diaz; Zachary N. Flamholz; Alexandra B. Keenan; Alexander Lachmann; Megan L. Wojciechowicz; Ross L. Cagan; Avi Ma'ayan (Nucleic Acids Res., 2019)

Geneshot: search engine for ranking genes from arbitrary text queries. - Alexander Lachmann; Brian M. Schilder; Megan L. Wojciechowicz; Denis Torre; Maxim V. Kuleshov; Alexandra B. Keenan; Avi Ma'ayan (Nucleic Acids Res., 2019)