Bayesian Segmental Models with Multiple Sequence Alignment Profiles for Protein Secondary Structure and Contact Map Prediction. - Wei Chu; Zoubin Ghahramani; Alexei A. Podtelezhnikov; David L. Wild (IEEE ACM Trans. Comput. Biol. Bioinform., 2006)

CRANKITE: A fast polypeptide backbone conformation sampler. - Alexei A. Podtelezhnikov; David L. Wild (Source Code Biol. Medicine, 2008)