WebProAnalyst: an interactive tool for analysis of quantitative structure-activity relationships in protein families. - Vladimir A. Ivanisenko; Alexey M. Eroshkin; Nikolay A. Kolchanov (Nucleic Acids Res., 2005)

CutDB: a proteolytic event database. - Yoshinobu Igarashi; Alexey M. Eroshkin; Svetlana Gramatikova; Kosi Gramatikoff; Ying Zhang 004; Jeffrey W. Smith; Andrei Osterman; Adam Godzik (Nucleic Acids Res., 2007)

PMAP: databases for analyzing proteolytic events and pathways. - Yoshinobu Igarashi; Emily Heureux; Kutbuddin S. Doctor; Priti Talwar; Svetlana Gramatikova; Kosi Gramatikoff; Ying Zhang 004; Michael L. Blinov; Salmaz S. Ibragimova; Sarah E. Boyd; Boris I. Ratnikov; Piotr Cieplak; et al. (Nucleic Acids Res., 2009)

bNAber: database of broadly neutralizing HIV antibodies. - Alexey M. Eroshkin; Andrew LeBlanc; Dana Weekes; Kai W. Post; Zhanwen Li; Akhil Rajput; Sal T. Butera; Dennis R. Burton; Adam Godzik (Nucleic Acids Res., 2014)