An Automatic Image Processing Workflow for Daily Magnetic Resonance Imaging Quality Assurance. - Juha I. Peltonen; Teemu Mäkelä; Alexey Sofiev; Eero Salli (J. Digit. Imaging, 2017)

Marker-controlled watershed with deep edge emphasis and optimized H-minima transform for automatic segmentation of densely cultivated 3D cell nuclei. - Tuomas Kaseva; Bahareh Omidali; Eero Hippeläinen; Teemu Mäkelä; Ulla Wilppu; Alexey Sofiev; Arto Merivaara; Marjo Yliperttula; Sauli Savolainen; Eero Salli (BMC Bioinform., 2022)