Experimental validation of in silico target predictions on synergistic protein targets. - Isidro Cortes-Ciriano; Alexios Koutsoukas; Olga Abian; Andreas Bender 002; Adrián Velázquez-Campoy (J. Cheminformatics, 2013)

Using machine learning techniques for rationalising phenotypic readouts from a rat sleeping model. - Georgios Drakakis; Alexios Koutsoukas; Suzanne Clare Brewerton; David A. Evans 002; Andreas Bender 002 (J. Cheminformatics, 2013)

Chemogenomics approaches to rationalising compound action of traditional Chinese and Ayurvedic medicines. - Fazlin Fauzi; Alexios Koutsoukas; Robert Lowe; Kalpana Joshi; Tai-Ping Fan; Andreas Bender 002 (J. Cheminformatics, 2013)

Relating GPCRs pharmacological space based on ligands chemical similarities. - Alexios Koutsoukas; Rubben Torella; George Drakakis; Andreas Bender 002; Robert C. Glen (J. Cheminformatics, 2013)

Annotating targets with pathways: extending approaches to mode of action analysis. - Sonia Liggi; Alexios Koutsoukas; Yasaman Motamedi; Robert C. Glen; Andreas Bender 002 (J. Cheminformatics, 2013)

Chemogenomics Approaches to Rationalizing the Mode-of-Action of Traditional Chinese and Ayurvedic Medicines. - Fazlin Fauzi; Alexios Koutsoukas; Robert Lowe; Kalpana Joshi; Tai-Ping Fan; Robert C. Glen; Andreas Bender 002 (J. Chem. Inf. Model., 2013)

In Silico Target Predictions: Defining a Benchmarking Data Set and Comparison of Performance of the Multiclass Naïve Bayes and Parzen-Rosenblatt Window. - Alexios Koutsoukas; Robert Lowe; Yasaman KalantarMotamedi; Hamse Y. Mussa; Werner Klaffke; John B. O. Mitchell; Robert C. Glen; Andreas Bender 002 (J. Chem. Inf. Model., 2013)

Erratum for "In Silico Target Predictions: Defining a Benchmarking Data Set and Comparison of Performance of the Multiclass Naı̈ve Bayes and Parzen-Rosenblatt Window". - Alexios Koutsoukas; Robert Lowe; Yasaman KalantarMotamedi; Hamse Y. Mussa; Werner Klaffke; John B. O. Mitchell; Robert C. Glen; Andreas Bender 002 (J. Chem. Inf. Model., 2014)

How Diverse Are Diversity Assessment Methods? A Comparative Analysis and Benchmarking of Molecular Descriptor Space. - Alexios Koutsoukas; Shardul Paricharak; Warren R. J. D. Galloway; David R. Spring; Adriaan P. IJzerman; Robert C. Glen; David Marcus; Andreas Bender 002 (J. Chem. Inf. Model., 2014)

Investigating Multiview and Multitask Learning Frameworks for Predicting Drug-Disease Associations. - Sai Nivedita Chandrasekaran; Alexios Koutsoukas; Jun Huan (BCB, 2016)

Deep-learning: investigating deep neural networks hyper-parameters and comparison of performance to shallow methods for modeling bioactivity data. - Alexios Koutsoukas; Keith J. Monaghan; Xiaoli Li 013; Jun Huan (J. Cheminformatics, 2017)

In-Silico Extraction of Design Ideas Using MMPA-by-QSAR and its Application on ADME Endpoints. - Alexios Koutsoukas; George Chang; Christopher E. Keefer (J. Chem. Inf. Model., 2019)