IPPRED: Server for Proteins Interactions Inference. - Nicolas Goffard; Virginie Garcia; Florian Iragne; Alexis Groppi; Antoine de Daruvar (Bioinform., 2003)

Finishing bacterial genome assemblies with Mix. - Hayssam Soueidan; Florence Maurier; Alexis Groppi; Pascal Sirand-Pugnet; Florence Tardy; Christine Citti; Virginie Dupuy; Macha Nikolski (BMC Bioinform., 2013)

TrialMatchAI: An End-to-End AI-powered Clinical Trial Recommendation System to Streamline Patient-to-Trial Matching. - Majd Abdallah; Sigve Nakken; Mariska Bierkens; Johanna Galvis; Alexis Groppi; Slim Karkar; Lana Meiqari; Maria Alexandra Rujano; Steve Canham; Rodrigo Dienstmann; Remond J. A. Fijneman; Eivind Hovig; et al. (CoRR, 2025)