Local Adaptive Wiener Filtering for Class Averaging in Single Particle Reconstruction. - Ali Abdollahzadeh; Erman Acar; Sari Peltonen; Ulla Ruotsalainen (SCIA (2), 2017)

Cylindrical Shape Decomposition Algorithm for 3D Segmentation. - Ali Abdollahzadeh; Alejandra Sierra; Jussi Tohka (CoRR, 2019)

Cylindrical Shape Decomposition for 3D Segmentation of Tubular Objects. - Ali Abdollahzadeh; Alejandra Sierra; Jussi Tohka (IEEE Access, 2021)

Transfer Learning in Magnetic Resonance Brain Imaging: A Systematic Review. - Juan Miguel Valverde; Vandad Imani; Ali Abdollahzadeh; Riccardo de Feo; Mithilesh Prakash; Robert Ciszek; Jussi Tohka (J. Imaging, 2021)

gACSON software for automated segmentation and morphology analyses of myelinated axons in 3D electron microscopy. - Andrea Behanova; Ali Abdollahzadeh; Ilya Belevich; Eija Jokitalo; Alejandra Sierra; Jussi Tohka (Comput. Methods Programs Biomed., 2022)

Editorial: Deep learning and neuroimage processing in understanding neurological diseases. - Joana Carvalho; Ali Abdollahzadeh; Ricardo José Ferrari (Frontiers Comput. Neurosci., 2024)

Scattering approach to diffusion quantifies axonal damage in brain injury. - Ali Abdollahzadeh; Ricardo Coronado-Leija; Hong-Hsi Lee; Alejandra Sierra; Els Fieremans; Dmitry S. Novikov (CoRR, 2025)