SECIMTools: a suite of metabolomics data analysis tools. - Alexander S. Kirpich; Miguel Ibarra; Oleksandr Moskalenko; Justin M. Fear; Joseph Gerken; Xinlei Mi; Ali Ashrafi; Alison M. Morse; Lauren M. McIntyre (BMC Bioinform., 2018)

A new hybrid conjugate gradient method for large-scale unconstrained optimization problem with non-convex objective function. - Zahra Khoshgam; Ali Ashrafi (Comput. Appl. Math., 2019)

A new modified scaled conjugate gradient method for large-scale unconstrained optimization with non-convex objective function. - Zahra Khoshgam; Ali Ashrafi (Optim. Methods Softw., 2019)

A new descent spectral Polak-Ribière-Polyak method based on the memoryless BFGS update. - Maryam Khoshsimaye-Bargard; Ali Ashrafi (Comput. Appl. Math., 2021)

Numerical pricing based on fractional Black-Scholes equation with time-dependent parameters under the CEV model: Double barrier options. - Maryam Rezaei; Ahmad Reza Yazdanian; Ali Ashrafi; Seyed Mahdi Mahmoudi (Comput. Math. Appl., 2021)

Quadratic double-ratio minimax optimization. - Arezu Zare; Ali Ashrafi; Yong Xia 002 (Oper. Res. Lett., 2021)

SDO and LDO relaxation approaches to complex fractional quadratic optimization. - Ali Ashrafi; Arezu Zare (RAIRO Oper. Res., 2021)

A descent family of the spectral Hestenes-Stiefel method by considering the quasi-Newton method. - Maryam Khoshsimaye-Bargard; Ali Ashrafi (Optim. Methods Softw., 2023)

A family of the modified three-term Hestenes-Stiefel conjugate gradient method with sufficient descent and conjugacy conditions. - Maryam Khoshsimaye-Bargard; Ali Ashrafi (J. Appl. Math. Comput., 2023)

A descent spectral Dai-Liao method based on the quasi-Newton aspects. - Maryam Khoshsimaye-Bargard; Ali Ashrafi (Numer. Algorithms, 2023)

A projected hybridization of the Hestenes-Stiefel and Dai-Yuan conjugate gradient methods with application to nonnegative matrix factorization. - Maryam Khoshsimaye-Bargard; Ali Ashrafi (J. Appl. Math. Comput., 2025)

Improving the hyperspectral image classification using convolutional neural networks and spectral-spatial information. - Davood Akbari; Komeil Rokni; Ali Ashrafi (Earth Sci. Informatics, 2025)