GTED: Graph Traversal Edit Distance. - Ali Ebrahimpour Boroojeny; Akash Shrestha; Ali Sharifi-Zarchi; Suzanne Renick Gallagher; Süleyman Cenk Sahinalp; Hamidreza Chitsaz (RECOMB, 2018)

Time-Delay Estimation in State and Output Equations of Nonlinear Systems Using Optimal Computational Approach. - Mohammad Ali Abooshahab; Mohsen Ekramian; Mohammad Ataei; Ali Ebrahimpour Boroojeny (J. Optim. Theory Appl., 2019)

Graph Traversal Edit Distance and Extensions. - Ali Ebrahimpour Boroojeny; Akash Shrestha; Ali Sharifi-Zarchi; Suzanne Renick Gallagher; Süleyman Cenk Sahinalp; Hamidreza Chitsaz (J. Comput. Biol., 2020)

PyGTED: Python Application for Computing Graph Traversal Edit Distance. - Ali Ebrahimpour Boroojeny; Akash Shrestha; Ali Sharifi-Zarchi; Suzanne Renick Gallagher; Süleyman Cenk Sahinalp; Hamidreza Chitsaz (J. Comput. Biol., 2020)

BPPart: RNA-RNA Interaction Partition Function in the Absence of Entropy. - Ali Ebrahimpour Boroojeny; Sanjay V. Rajopadhye; Hamidreza Chitsaz (WABI, 2021)

Spectrum Extraction and Clipping for Implicitly Linear Layers. - Ali Ebrahimpour Boroojeny; Matus Telgarsky; Hari Sundaram (AISTATS, 2024)

LOTOS: Layer-wise Orthogonalization for Training Robust Ensembles. - Ali Ebrahimpour Boroojeny; Hari Sundaram; Varun Chandrasekaran (CoRR, 2024)

Training Robust Ensembles Requires Rethinking Lipschitz Continuity. - Ali Ebrahimpour Boroojeny; Hari Sundaram; Varun Chandrasekaran (ICLR, 2025)

AMUN: Adversarial Machine UNlearning. - Ali Ebrahimpour Boroojeny; Hari Sundaram; Varun Chandrasekaran (CoRR, 2025)

On the Necessity of Output Distribution Reweighting for Effective Class Unlearning. - Yian Wang; Ali Ebrahimpour Boroojeny; Hari Sundaram (CoRR, 2025)