BCAWT: Automated tool for codon usage bias analysis for molecular evolution. - Ali Mostafa Anwar (J. Open Source Softw., 2019)

LimROTS: a hybrid method integrating empirical Bayes and reproducibility-optimized statistics for robust differential expression analysis. - Ali Mostafa Anwar; Akewak Jeba; Leo Lahti; Eleanor Coffey (Bioinform., 2025)