Patchnet: Interpretable Neural Networks for Image Classification. - Adityanarayanan Radhakrishnan; Charles Durham; Ali Soylemezoglu; Caroline Uhler (CoRR, 2017)

Predicting cell lineages using autoencoders and optimal transport. - Karren D. Yang; Karthik Damodaran; Saradha Venkatachalapathy; Ali Soylemezoglu; G. V. Shivashankar; Caroline Uhler (PLoS Comput. Biol., 2020)