The identification of cis-regulatory elements: A review from a machine learning perspective. - Yifeng Li 001; Chih-Yu Chen; Alice Mary Kaye; Wyeth W. Wasserman (Biosyst., 2015)

Demonstrating the utility of flexible sequence queries against indexed short reads with FlexTyper. - Phillip Andrew Richmond; Alice Mary Kaye; Godfrain Jacques Kounkou; Tamar Vered Av-Shalom; Wyeth W. Wasserman (PLoS Comput. Biol., 2021)