The NOESY Jigsaw: Automated Protein Secondary Structure and Main-Chain Assignment from Sparse, Unassigned NMR Data. - Christopher Bailey-Kellogg; Alik Widge; John J. Kelley 001; Marcelo J. Berardi; John H. Bushweller; Bruce Randall Donald (J. Comput. Biol., 2000)

Conductive Polymer "Molecular Wires" for Neuro-robotic Interfaces. - Alik Widge; Malika Jeffries-El; Carl F. Lagenaur; Victor W. Weedn; Yoky Matsuoka (ICRA, 2004)

Direct Neural Control of Anatomically Correct Robotic Hands. - Alik Widge; Chet T. Moritz; Yoky Matsuoka (Brain-Computer Interfaces, 2010)

Package architecture and component design for an implanted neural stimulator with closed loop control. - Caroline K. Bjune; Thomas F. Marinis; Jeanne M. Brady; James Moran; Jesse J. Wheeler; Tirunelveli S. Sriram; Philip D. Parks; Alik S. Widge; Darin D. Dougherty; Emad N. Eskandar (EMBC, 2015)

Estimating a dynamic state to relate neural spiking activity to behavioral signals during cognitive tasks. - Xinyi Deng; Rose T. Faghih; Riccardo Barbieri; Angelique C. Paulk; Wael F. Asaad; Emery N. Brown; Darin D. Dougherty; Alik S. Widge; Emad N. Eskandar; Uri T. Eden (EMBC, 2015)

Characterization of fear conditioning and fear extinction by analysis of electrodermal activity. - Rose T. Faghih; Patrick A. Stokes; Marie-France Marin; Rachel G. Zsido; Sam Zorowitz; Blake L. Rosenbaum; Huijin Song; Mohammed R. Milad; Darin D. Dougherty; Emad N. Eskandar; Alik S. Widge; Emery N. Brown; et al. (EMBC, 2015)

Neural signal processing and closed-loop control algorithm design for an implanted neural recording and stimulation system. - Lei H. Hamilton; Marc W. McConley; Kai Angermueller; David Goldberg 003; Massimiliano Corba; Louis Y. Kim; James Moran; Philip D. Parks; Sang (Peter) Chin; Alik S. Widge; Darin D. Dougherty; Emad N. Eskandar (EMBC, 2015)

An implantable 64-channel neural interface with reconfigurable recording and stimulation. - Jesse J. Wheeler; Keith Baldwin; Alex Kindle; Daniel Guyon; Brian Nugent; Carlos Segura; John Rodriguez; Andrew Czarnecki; Hailey J. Dispirito; John Lachapelle; Philip D. Parks; James Moran; et al. (EMBC, 2015)

Cognitive state prediction using an EM algorithm applied to Gamma distributed data. - Ali Yousefi; Angelique C. Paulk; Thilo Deckersbach; Darin D. Dougherty; Emad N. Eskandar; Alik S. Widge; Uri T. Eden (EMBC, 2015)

Predicting local field potentials with recurrent neural networks. - Louis Y. Kim; Jacob Harer; Akshay Rangamani; James Moran; Philip D. Parks; Alik Widge; Emad N. Eskandar; Darin D. Dougherty; Sang (Peter) Chin (EMBC, 2016)

Predicting learning dynamics in Multiple-Choice Decision-Making Tasks using a variational Bayes technique. - Ali Yousefi; Reza Kakooee; Mohammad T. H. Beheshti; Darin D. Dougherty; Emad N. Eskandar; Alik S. Widge; Uri T. Eden (EMBC, 2017)

The interactive electrode localization utility: software for automatic sorting and labeling of intracranial subdural electrodes. - Roan A. LaPlante; Wei Tang 004; Noam Peled; Deborah I. Vallejo; Mia Borzello; Darin D. Dougherty; Emad N. Eskandar; Alik S. Widge; Sydney S. Cash; Steven M. Stufflebeam (Int. J. Comput. Assist. Radiol. Surg., 2017)

Continuous Phase Estimation for Phase-Locked Neural Stimulation Using an Autoregressive Model for Signal Prediction. - Ethan Blackwood; Meng-Chen Lo; Alik S. Widge (EMBC, 2018)

Continuous Prediction of Cognitive State Using A Marked-Point Process Modeling Framework. - Yalda Amidi; Angelique C. Paulk; Darin D. Dougherty; Sydney S. Cash; Alik S. Widge; Uri T. Eden; Ali Yousefi (EMBC, 2019)

Decoding Hidden Cognitive States From Behavior and Physiology Using a Bayesian Approach. - Ali Yousefi; Ishita Basu; Angelique C. Paulk; Noam Peled; Emad N. Eskandar; Darin D. Dougherty; Sydney S. Cash; Alik S. Widge; Uri T. Eden (Neural Comput., 2019)

CLoSES: A platform for closed-loop intracranial stimulation in humans. - Rina Zelmann; Angelique C. Paulk; Ishita Basu; Anish A. Sarma; Ali Yousefi; Britni Crocker; Emad N. Eskandar; Ziv Williams; G. Rees Cosgrove; Daniel S. Weisholtz; Darin D. Dougherty; Wilson Truccolo; et al. (NeuroImage, 2020)

Decoding Human Cognitive Control Using Functional Connectivity of Local Field Potentials. - S. V. Sandeep Avvaru; Nicole R. Provenza; Alik S. Widge; Keshab K. Parhi (EMBC, 2021)

Spectral Features Based Decoding of Task Engagement: The Role of Theta and High Gamma Bands in Cognitive Control. - S. V. Sandeep Avvaru; Nicole R. Provenza; Alik S. Widge; Keshab K. Parhi (EMBC, 2021)

Local and distant responses to single pulse electrical stimulation reflect different forms of connectivity. - Britni Crocker; Lauren Ostrowski; Ziv M. Williams; Darin D. Dougherty; Emad N. Eskandar; Alik S. Widge; Catherine Jean Chu; Sydney S. Cash; Angelique C. Paulk (NeuroImage, 2021)

Deep brain stimulation for psychiatric disorders: From focal brain targets to cognitive networks. - Christi R. P. Sullivan; Sarah Olsen; Alik S. Widge (NeuroImage, 2021)

A 16-Channel 60µW Neural Synchrony Processor for Multi-Mode Phase-Locked Neurostimulation. - Uisub Shin; Cong Ding 004; Laxmeesha Somappa; Virginia Woods; Alik S. Widge; Mahsa Shoaran (CICC, 2022)

Neural mass model-based study of frontal-temporal theta oscillations in human subjects during the performance of a cognitive control task. - Alexander Ross; Angelique C. Paulk; Sydney S. Cash; Alik S. Widge; Ishita Basu (EMBC, 2022)

A 16-Channel Low-Power Neural Connectivity Extraction and Phase-Locked Deep Brain Stimulation SoC. - Uisub Shin; Cong Ding 004; Virginia Woods; Alik S. Widge; Mahsa Shoaran (CoRR, 2022)

Hybrid Decoders for Marked Point Process Observations and External Influences. - Dilranjan S. Wickramasuriya; Leslie J. Crofford; Alik S. Widge; Rose T. Faghih (IEEE Trans. Biomed. Eng., 2023)

Method for Synthetic Generation of LFP Data for Testing of Feature Extraction Algorithms*. - Heather J. Breidenbach; Virginia Woods; Uisub Shin; Evan M. Dastin-van Rijn; Mahsa Shoaran; Alik S. Widge (EMBC, 2024)

Latent Variable Double Gaussian Process Model for Decoding Complex Neural Data. - Navid Ziaei; Joshua J. Stim; Melanie D. Goodman-Keiser; Scott Sponheim; Alik S. Widge; Sasoun Krikorian; Ali Yousefi (EMBC, 2024)

A Bayesian Gaussian Process-Based Latent Discriminative Generative Decoder (LDGD) Model for High-Dimensional Data. - Navid Ziaei; Behzad Nazari; Uri T. Eden; Alik S. Widge; Ali Yousefi (IEEE Access, 2024)

Pybehave: a hardware agnostic, Python-based framework for controlling behavioral neuroscience experiments. - Evan M. Dastin-van Rijn; Joel Nielsen; Elizabeth M. Sachse; Christina Li; Megan E. Mensinger; Stefanie G. Simpson; Michelle C. Buccini; Francesca A. Iacobucci; David J. Titus; Alik S. Widge (J. Open Source Softw., 2024)

Determining the Number of Clusters in Clinical Response of TMS Treatment using Hyperdimensional Computing. - Lulu Ge; Aaron N. McInnes; Alik S. Widge; Keshab K. Parhi (J. Signal Process. Syst., 2024)

Prediction of Clinical Response of Transcranial Magnetic Stimulation Treatment for Major Depressive Disorder Using Hyperdimensional Computing. - Lulu Ge; Aaron N. McInnes; Alik S. Widge; Keshab K. Parhi (IEEE J. Biomed. Health Informatics, 2025)