TrackSigFreq: Subclonal Reconstructions Based on Mutation Signatures and Allele Frequencies. - Caitlin F. Harrigan; Yulia Rubanova; Quaid Morris; Alina Selega (PSB, 2020)

Multi-objective Bayesian Optimization with Heuristic Objectives for Biomedical and Molecular Data Analysis Workflows. - Alina Selega; Kieran R. Campbell (Trans. Mach. Learn. Res., 2023)