Discovering Communities in Networks: A Linear Programming Approach Using Max-Min Modularity. - Arman Ferdowsi; Alireza Khanteymoori (FedCSIS, 2021)

ARP: asexual reproduction programming. - Alireza Khanteymoori; Fatemeh Alamdar; Farzaneh Ghorbani (Connect. Sci., 2021)

Perspectives on automated composition of workflows in the life sciences. - Anna-Lena Lamprecht; Magnus Palmblad; Jon C. Ison; Veit Schwämmle; Mohammad Sadnan Al Manir; Ilkay Altintas; Christopher J. O. Baker; Ammar Ben Hadj Amor; Salvador Capella-Gutiérrez; Paulos Charonyktakis; Michael R. Crusoe; Yolanda Gil; et al. (F1000Research, 2021)

Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine. - Qiang Gu; Anup Kumar; Simon Bray; Allison Creason; Alireza Khanteymoori; Vahid Jalili; Björn A. Grüning; Jeremy Goecks (PLoS Comput. Biol., 2021)

A Comprehensive Survey on Model Quantization for Deep Neural Networks. - Babak Rokh; Ali Azarpeyvand; Alireza Khanteymoori (CoRR, 2022)

CRISPR genome editing using computational approaches: A survey. - Roghayyeh Alipanahi; Leila Safari; Alireza Khanteymoori (Frontiers Bioinform., 2022)

TSCDA: a dynamic two-stage community discovery approach. - Arman Ferdowsi; Maryam Dehghan Chenary; Alireza Khanteymoori (Soc. Netw. Anal. Min., 2022)

Data-Driven and Knowledge-Based Algorithms for Gene Network Reconstruction on High-Dimensional Data. - Omid Abbaszadeh; Ali Azarpeyvand; Alireza Khanteymoori; Abbas Bahari (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

IsoGloVe: A New Count-based Graph Embedding Method based on Geodesic Distance. - Sepideh Nahali; Leila Safari; Alireza Khanteymoori; Hajer Ayadi; Jimmy X. Huang (Canadian AI, 2023)

A Comprehensive Survey on Model Quantization for Deep Neural Networks in Image Classification. - Babak Rokh; Ali Azarpeyvand; Alireza Khanteymoori (ACM Trans. Intell. Syst. Technol., 2023)

Exploring the Use of a Large Language Model for Data Extraction in Systematic Reviews: A Rapid Feasibility Study. - Lena Schmidt; Kaitlyn Hair; Sergio Graziozi; Fiona Campbell; Claudia Kapp; Alireza Khanteymoori; Dawn Craig; Mark Engelbert; James Thomas 001 (ALTARS@ECIR, 2024)

Open and Sustainable AI: challenges, opportunities and the road ahead in the life sciences. - Gavin Farrell; Eleni Adamidi; Rafael Andrade Buono; Mihail Anton; Omar Abdelghani Attafi; Salvador Capella-Gutiérrez; Emidio Capriotti; Leyla Jael Castro; Davide Cirillo; Lisa C. Crossman; Christophe Dessimoz; Alexandros C. Dimopoulos; et al. (CoRR, 2025)