Analysing the ability to retain sidechain hydrogen-bonds in mutant proteins. - Alison L. Cuff; Robert W. Janes; Andrew C. R. Martin (Bioinform., 2006)

The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution. - Lesley H. Greene; Tony E. Lewis; Sarah Addou; Alison L. Cuff; Timothy Dallman; Mark Dibley; Oliver Redfern; Frances M. G. Pearl; Rekha Nambudiry; Adam James Reid; Ian Sillitoe; Corin Yeats; et al. (Nucleic Acids Res., 2007)

The CATH classification revisited - architectures reviewed and new ways to characterize structural divergence in superfamilies. - Alison L. Cuff; Ian Sillitoe; Tony E. Lewis; Oliver Redfern; Richard Garratt; Janet M. Thornton; Christine A. Orengo (Nucleic Acids Res., 2009)

Extending CATH: increasing coverage of the protein structure universe and linking structure with function. - Alison L. Cuff; Ian Sillitoe; Tony E. Lewis; Andrew B. Clegg; Robert Rentzsch; Nicholas Furnham; Marialuisa Pellegrini-Calace; David T. Jones; Janet M. Thornton; Christine A. Orengo (Nucleic Acids Res., 2011)

FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies. - Nicholas Furnham; Ian Sillitoe; Gemma L. Holliday; Alison L. Cuff; Syed Asad Rahman; Roman A. Laskowski; Christine A. Orengo; Janet M. Thornton (Nucleic Acids Res., 2012)

Exploring the Evolution of Novel Enzyme Functions within Structurally Defined Protein Superfamilies. - Nicholas Furnham; Ian Sillitoe; Gemma L. Holliday; Alison L. Cuff; Roman A. Laskowski; Christine A. Orengo; Janet M. Thornton (PLoS Comput. Biol., 2012)

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. - Tony E. Lewis; Ian Sillitoe; Antonina Andreeva; Tom L. Blundell; Daniel W. A. Buchan; Cyrus Chothia; Alison L. Cuff; Jose M. Dana; Ioannis Filippis; Julian Gough; Sarah Hunter; David T. Jones; et al. (Nucleic Acids Res., 2013)

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures. - Ian Sillitoe; Alison L. Cuff; Benoit H. Dessailly; Natalie L. Dawson; Nicholas Furnham; David A. Lee; Jonathan G. Lees; Tony E. Lewis; Romain A. Studer; Robert Rentzsch; Corin Yeats; Janet M. Thornton; et al. (Nucleic Acids Res., 2013)

CATH: comprehensive structural and functional annotations for genome sequences. - Ian Sillitoe; Tony E. Lewis; Alison L. Cuff; Sayoni Das; Paul Ashford; Natalie L. Dawson; Nicholas Furnham; Roman A. Laskowski; David A. Lee; Jonathan G. Lees; Sonja Lehtinen; Romain A. Studer; et al. (Nucleic Acids Res., 2015)