Robustness of transcriptional Regulation in yeast-like Model Boolean Networks. - Murat Tugrul; Alkan Kabakçioglu (Int. J. Bifurc. Chaos, 2010)

B-Tensor: Brain Connectome Tensor Factorization for Alzheimer's Disease. - Göktekin Durusoy; Zerrin Yildirim; Demet Yüksel Dal; Cigdem Ulasoglu-Yildiz; Elif Kurt; Günes Bayir; Erhan Özacar; Evren Özarslan; Asli Demirtas-Tatlidede; Basar Bilgiç; Tamer Demiralp; Hakan Gürvit; et al. (IEEE J. Biomed. Health Informatics, 2021)

Machine learning in and out of equilibrium. - Shishir Adhikari; Alkan Kabakçioglu; Alexander Strang; Deniz Yuret; Michael Hinczewski (CoRR, 2023)

Disentangled Attention Graph Neural Network for Alzheimer's Disease Diagnosis. - Gurur Gamgam; Alkan Kabakçioglu; Demet Yüksel Dal; Burak Acar (MICCAI (10), 2024)

Siamese Graph Convolutional Network quantifies increasing structure-function discrepancy over the cognitive decline continuum. - Gurur Gamgam; Zerrin Yildirim; Alkan Kabakçioglu; Hakan Gürvit; Tamer Demiralp; Burak Acar (Comput. Methods Programs Biomed., 2024)