POPTEX: interactive ocean model visualization using texture mapping hardware. - Allen McPherson; Mathew Maltrud (IEEE Visualization, 1998)

An Evolving Infrastructure to Support Accelerated Strategic Computing Initiative (ASCI) Multi-Source Visualization and Data Analysis Needs. - James P. Ahrens; Patrick S. McCormick; Allen McPherson; Jamie Painter (PP, 1999)

Interactive Texture-Based Volume Rendering for Large Data Sets. - Joe Kniss; Patrick S. McCormick; Allen McPherson; James P. Ahrens; James S. Painter; Alan Keahey; Charles D. Hansen (IEEE Computer Graphics and Applications, 2001)

A Model for Volume Lighting and Modeling. - Joe Kniss; Simon Premoze; Charles D. Hansen; Peter Shirley; Allen McPherson (IEEE Trans. Vis. Comput. Graph., 2003)

Computational Co-design of a Multiscale Plasma Application: A Process and Initial Results. - Joshua Payne; Dana A. Knoll; Allen McPherson; William T. Taitano; Luis Chacón; Guangye Chen; Scott Pakin (IPDPS, 2014)

Docker-Enabled Build and Execution Environment (BEE): an Encapsulated Environment Enabling HPC Applications Running Everywhere. - Jieyang Chen; Qiang Guan; Xin Liang 001; Louis James Vernon; Allen McPherson; Li-Ta Lo; Zizhong Chen; James Paul Ahrens (CoRR, 2017)

Build and Execution Environment (BEE): an Encapsulated Environment Enabling HPC Applications Running Everywhere. - Jieyang Chen; Qiang Guan; Xin Liang 001; Paul Bryant; Patricia Grubel; Allen McPherson; Li-Ta Lo; Timothy Randles; Zizhong Chen; James Paul Ahrens (IEEE BigData, 2018)

BeeFlow: A Workflow Management System for In Situ Processing across HPC and Cloud Systems. - Jieyang Chen; Qiang Guan; Zhao Zhang 007; Xin Liang 001; Louis James Vernon; Allen McPherson; Li-Ta Lo; Patricia Grubel; Tim Randles; Zizhong Chen; James P. Ahrens (ICDCS, 2018)