On the multivariable gain margin problem. - Allen R. Tannenbaum (Autom., 1986)

Robotic manipulators and the geometry of real semialgebraic sets. - Allen R. Tannenbaum; Yosef Yomdin (IEEE J. Robotics Autom., 1987)

Frequency domain analysis and robust control design for an ideal flexible beam. - Kathryn E. Lenz; Hitay Özbay; Allen R. Tannenbaum; Janos Turi; Blaise G. Morton (Autom., 1991)

On the structure of suboptimal H∞ controllers in the sensitivity minimization problem for distributed stable plants. - Hitay Özbay; Allen R. Tannenbaum (Autom., 1991)

From Curve Detection to Shape Description: an outline. - Steven W. Zucker; Allan Dobbins; Lee Iverson; Benjamin B. Kimia; Allen R. Tannenbaum (Computer Vision: Systems, Theory and Applications, 1993)

Affine invariant scale-space. - Guillermo Sapiro; Allen R. Tannenbaum (Int. J. Comput. Vis., 1993)

H∞-Optimal Control and Related Minimax Design Problems (Tamer Basar and Pierre Bernhard). - Allen R. Tannenbaum (SIAM Rev., 1993)

Area and Lenght Preserving Geometric Invariant Scale-Spaces. - Guillermo Sapiro; Allen R. Tannenbaum (ECCV (2), 1994)

Experiments on Geometric Image Enhancement. - Guillermo Sapiro; Allen R. Tannenbaum; Yu-Li You; Mostafa Kaveh (ICIP (2), 1994)

Analysis and Design of Anisotropic Diffusion for Image Processing. - Yu-Li You; Mostafa Kaveh; Wenyuan Xu 002; Allen R. Tannenbaum (ICIP (2), 1994)

On Optimal Control Methods in Computer Vision and Image Processing. - Benjamin B. Kimia; Allen R. Tannenbaum; Steven W. Zucker (Geometry-Driven Diffusion in Computer Vision, 1994)

Differential Invariant Signatures and Flows in Computer Vision: A Symmetry Group Approach. - Peter J. Olver; Guillermo Sapiro; Allen R. Tannenbaum (Geometry-Driven Diffusion in Computer Vision, 1994)

Gradient Flows and Geometric Active Contour Models. - Satyanad Kichenassamy; Arun Kumar 009; Peter J. Olver; Allen R. Tannenbaum; Anthony J. Yezzi (ICCV, 1995)

On ill-posed anisotropic diffusion models. - Yu-Li You; Wenyuan Xu 002; Mostafa Kaveh; Allen R. Tannenbaum (ICIP, 1995)

Shapes, shocks, and deformations I: The components of two-dimensional shape and the reaction-diffusion space. - Benjamin B. Kimia; Allen R. Tannenbaum; Steven W. Zucker (Int. J. Comput. Vis., 1995)

Area and Length Preserving Geometric Invariant Scale-Spaces. - Guillermo Sapiro; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 1995)

Stability margin optimization via interpolation and conformal mappings. - Juan Cockburn; Yariv Sidar; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 1995)

Affine Invariant Detection: Edges, Active Contours, and Segments. - Peter J. Olver; Guillermo Sapiro; Allen R. Tannenbaum (CVPR, 1996)

Optical flow: a curve evolution approach. - Arun Kumar 009; Allen R. Tannenbaum; Gary J. Balas (IEEE Trans. Image Process., 1996)

Behavioral analysis of anisotropic diffusion in image processing . - Yu-Li You; Wenyuan Xu 002; Allen R. Tannenbaum; Mostafa Kaveh (IEEE Trans. Image Process., 1996)

Visual tracking, active vision, and gradient flows. - Allen R. Tannenbaum; Anthony J. Yezzi (Block Island Workshop on Vision and Control, 1997)

Area Minimizing Flows. - Kaleem Siddiqi; Steven W. Zucker; Allen R. Tannenbaum (ICIP (3), 1997)

Invariant Geometric Evolutions of Surfaces and Volumetric Smoothing. - Allen R. Tannenbaum; Guillermo Sapiro; Peter J. Olver (SIAM J. Appl. Math., 1997)

A Geometric Snake Model for Segmentation of Medical Imagery. - Anthony J. Yezzi; Satyanad Kichenassamy; Arun Kumar 009; Peter J. Olver; Allen R. Tannenbaum (IEEE Trans. Medical Imaging, 1997)

Hyperbolic "Smoothing" of Shapes. - Kaleem Siddiqi; Allen R. Tannenbaum; Steven W. Zucker (ICCV, 1998)

Knowledge-based Segmentation of SAR Images. - Steven Haker; Guillermo Sapiro; Allen R. Tannenbaum (ICIP (1), 1998)

Differential and Numerically Invariant Signature Curves Applied to Object Recognition. - Eugenio Calabi; Peter J. Olver; Chehrzad Shakiban; Allen R. Tannenbaum; Steven Haker (Int. J. Comput. Vis., 1998)

Area and length minimizing flows for shape segmentation. - Kaleem Siddiqi; Yves Bérubé Lauzière; Allen R. Tannenbaum; Steven W. Zucker (IEEE Trans. Image Process., 1998)

A Hamiltonian Approach to the Eikonal Equation. - Kaleem Siddiqi; Allen R. Tannenbaum; Steven W. Zucker (EMMCVPR, 1999)

On the Evolution of the Skeleton. - Jonas August; Allen R. Tannenbaum; Steven W. Zucker (ICCV, 1999)

The Hamilton-Jacobi Skeleton. - Kaleem Siddiqi; Sylvain Bouix; Allen R. Tannenbaum; Steven W. Zucker (ICCV, 1999)

Conformal Geometry and Brain Flattening. - Sigurd B. Angenent; Steven Haker; Allen R. Tannenbaum; Ron Kikinis (MICCAI, 1999)

Shapes, shocks and wiggles. - Kaleem Siddiqi; Benjamin B. Kimia; Allen R. Tannenbaum; Steven W. Zucker (Image Vis. Comput., 1999)

Curve evolution models for real-time identification with application to plasma etching. - Jordan M. Berg; Anthony J. Yezzi; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 1999)

On the Laplace-Beltrami Operator and Brain Surface Flattening. - Sigurd B. Angenent; Steven Haker; Allen R. Tannenbaum; Ron Kikinis (IEEE Trans. Medical Imaging, 1999)

High resolution sensing and anisotropic segmentation for SAR imagery. - Tryphon T. Georgiou; Allen R. Tannenbaum (CDC, 2000)

Robust control and tracking. - Allen R. Tannenbaum (CDC, 2000)

Noise-Resistant Affine Skeletons of Planar Curves. - Santiago Betelú; Guillermo Sapiro; Allen R. Tannenbaum; Peter J. Giblin (ECCV (1), 2000)

Non-distorting Flattening for Virtual Colonoscopy. - Steven Haker; Sigurd B. Angenent; Allen R. Tannenbaum; Ron Kikinis (MICCAI, 2000)

Knowledge-based segmentation of SAR data with learned priors. - Steven Haker; Guillermo Sapiro; Allen R. Tannenbaum (IEEE Trans. Image Process., 2000)

Nondistorting Flattening Maps and the 3D Visualization of Colon CT Images. - Steven Haker; Sigurd B. Angenent; Allen R. Tannenbaum; Ron Kikinis (IEEE Trans. Medical Imaging, 2000)

Conformal Surface Parameterization for Texture Mapping. - Steven Haker; Sigurd B. Angenent; Allen R. Tannenbaum; Ron Kikinis; Guillermo Sapiro; Michael Halle (IEEE Trans. Vis. Comput. Graph., 2000)

Mass-preserving maps for registration and visual tracking. - Steven Haker; Allen R. Tannenbaum (CDC, 2001)

Affine Invariant Erosion of 3D Shapes. - Santiago Betelú; Guillermo Sapiro; Allen R. Tannenbaum (ICCV, 2001)

Cubical homology and the topological classification of 2D and 3D imagery. - Madjid Allili; Konstantin Mischaikow; Allen R. Tannenbaum (ICIP (2), 2001)

Missile tracking using knowledge-based adaptive thresholding. - Steven Haker; Guillermo Sapiro; Allen R. Tannenbaum; Donald Washburn (ICIP (1), 2001)

Mass Preserving Mappings and Image Registration. - Steven Haker; Allen R. Tannenbaum; Ron Kikinis (MICCAI, 2001)

Total-variational-based optical flow for cardiac-wall motion tracking. - Arun Kumar 009; Steven Haker; Arthur E. Stillman; Cecilia W. Curry; Don P. Giddens; Allen R. Tannenbaum; Anthony J. Yezzi (Image Processing, 2001)

On the computation of the affine skeletons of planar curves and the detection of skew symmetry. - Santiago Betelú; Guillermo Sapiro; Allen R. Tannenbaum; Peter J. Giblin (Pattern Recognit., 2001)

On the computation of switching surfaces in optimal control: a Grobner basis approach. - Hans U. Walther; Tryphon T. Georgiou; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2001)

Analysis of blood vessel topology by cubical homology. - Konstantin Mischaikow; Pawel Pilarczyk; William D. Kalies; Marc Niethammer; Andrew Stein; Allen R. Tannenbaum (ICIP (2), 2002)

Angle-preserving mappings for the visualization of multi-branched vessels. - Lei Zhu 001; Steven Haker; Sylvain Bouix; Kaleem Siddiqi; Allen R. Tannenbaum (ICIP (2), 2002)

4D Active Surfaces for Cardiac Analysis. - Anthony J. Yezzi; Allen R. Tannenbaum (MICCAI (1), 2002)

Conformal flattening maps for the visualization of vessels. - Lei Zhu 001; Steven Haker; Allen R. Tannenbaum (Image-Guided Procedures, 2002)

Hamilton-Jacobi Skeletons. - Kaleem Siddiqi; Sylvain Bouix; Allen R. Tannenbaum; Steven W. Zucker (Int. J. Comput. Vis., 2002)

Crystalline Stochastic Systems and Curvature Driven Flows. - Gérard Ben Arous; Allen R. Tannenbaum; Ofer Zeitouni (Mathematical Systems Theory in Biology, Communications, Computation, and Finance, 2003)

Dynamic level sets for visual tracking. - Marc Niethammer; Allen R. Tannenbaum (CDC, 2003)

Flux Driven Fly Throughs. - Sylvain Bouix; Kaleem Siddiqi; Allen R. Tannenbaum (CVPR (1), 2003)

A stokes flow boundary integral measurement of tubular structure cross sections in two dimensions. - Marc Niethammer; Eric Pichon; Allen R. Tannenbaum; Peter J. Mucha (ICIP (1), 2003)

Algorithms for stochastic approximations of curvature flows. - Gozde B. Unal; Delphine Nain; Gérard Ben Arous; Nahum Shimkin; Allen R. Tannenbaum; Ofer Zeitouni (ICIP (2), 2003)

A Statistically Based Surface Evolution Method for Medical Image Segmentation: Presentation and Validation. - Eric Pichon; Allen R. Tannenbaum; Ron Kikinis (MICCAI (2), 2003)

Area-Preserving Mappings for the Visualization of Medical Structures. - Lei Zhu 001; Steven Haker; Allen R. Tannenbaum (MICCAI (2), 2003)

Length-Based Attacks for Certain Group Based Encryption Rewriting Systems - James P. Hughes 001; Allen R. Tannenbaum (CoRR, 2003)

Length-Based Attacks for Certain Group Based Encryption Rewriting Systems. - Jim Hughes; Allen R. Tannenbaum (IACR Cryptol. ePrint Arch., 2003)

Minimizing Flows for the Monge-Kantorovich Problem. - Sigurd B. Angenent; Steven Haker; Allen R. Tannenbaum (SIAM J. Math. Anal., 2003)

Active contours and optical flow for automatic tracking of flying vehicles. - Jincheol Ha; Christopher V. Alvino; Gallagher Pryor; Marc Niethammer; Eric N. Johnson; Allen R. Tannenbaum (ACC, 2004)

Automatic tracking of flying vehicles using geodesic snakes and Kalman filtering. - Amir Betser; Patricio A. Vela; Allen R. Tannenbaum (CDC, 2004)

Dynamic Geodesic Snakes for Visual Tracking. - Marc Niethammer; Allen R. Tannenbaum (CVPR (1), 2004)

Image morphing based on mutual information and optimal mass transport. - Lei Zhu 001; Yan Yang 004; Allen R. Tannenbaum; Steven Haker (ICIP, 2004)

Image Interpolation Based on Optimal Mass Preserving Mappings. - Lei Zhu 001; Allen R. Tannenbaum (ISBI, 2004)

Optimal Mass Transport for Registration and Warping. - Steven Haker; Lei Zhu 001; Allen R. Tannenbaum; Sigurd B. Angenent (Int. J. Comput. Vis., 2004)

Area-Based Medial Axis of Planar Curves. - Marc Niethammer; Santiago Betelú; Guillermo Sapiro; Allen R. Tannenbaum; Peter J. Giblin (Int. J. Comput. Vis., 2004)

Development and Test of Highly Autonomous Unmanned Aerial Vehicles. - Eric N. Johnson; Alison A. Proctor; Jincheol Ha; Allen R. Tannenbaum (J. Aerosp. Comput. Inf. Commun., 2004)

A statistically based flow for image segmentation. - Eric Pichon; Allen R. Tannenbaum; Ron Kikinis (Medical Image Anal., 2004)

Flying in formation using a pursuit guidance algorithm. - Amir Betser; Patricio A. Vela; Gallagher Pryor; Allen R. Tannenbaum (ACC, 2005)

Particle Filtering for Geometric Active Contours with Application to Tracking Moving and Deforming Objects. - Yogesh Rathi; Namrata Vaswani; Allen R. Tannenbaum; Anthony J. Yezzi (CVPR (2), 2005)

Multigrid computation of rotationally invariant non-linear optical flow. - Christopher V. Alvino; Allen R. Tannenbaum; Anthony J. Yezzi; Cecilia W. Curry (ICIP (3), 2005)

Curve segmentation using directional information, relation to pattern detection. - Eric Pichon; Allen R. Tannenbaum (ICIP (2), 2005)

Multiscale 3D Shape Analysis Using Spherical Wavelets. - Delphine Nain; Steven Haker; Aaron F. Bobick; Allen R. Tannenbaum (MICCAI (2), 2005)

A Hamilton-Jacobi-Bellman Approach to High Angular Resolution Diffusion Tractography. - Eric Pichon; Carl-Fredrik Westin; Allen R. Tannenbaum (MICCAI, 2005)

Harmonic Skeleton Guided Evaluation of Stenoses in Human Coronary Arteries. - Yan Yang 004; Lei Zhu 001; Steven Haker; Allen R. Tannenbaum; Don P. Giddens (MICCAI, 2005)

Mass Preserving Registration for Heart MR Images. - Lei Zhu 001; Steven Haker; Allen R. Tannenbaum (MICCAI (2), 2005)

Coronary vessel cores from 3D imagery: a topological approach. - Andrzej Szymczak; Allen R. Tannenbaum; Konstantin Mischaikow (Image Processing, 2005)

On the Evolution of Vector Distance Functions of Closed Curves. - Marc Niethammer; Patricio A. Vela; Allen R. Tannenbaum (Int. J. Comput. Vis., 2005)

Flux driven automatic centerline extraction. - Sylvain Bouix; Kaleem Siddiqi; Allen R. Tannenbaum (Medical Image Anal., 2005)

Flattening maps for the visualization of multibranched vessels. - Lei Zhu 001; Steven Haker; Allen R. Tannenbaum (IEEE Trans. Medical Imaging, 2005)

On a Stochastic Model of Geometric Snakes. - Anthony J. Yezzi; Delphine Nain; Gozde B. Unal; Ofer Zeitouni; Allen R. Tannenbaum (Handbook of Mathematical Models in Computer Vision, 2006)

Curve Shortening and Interacting Particle Systems. - Sigurd B. Angenent; Allen R. Tannenbaum; Anthony J. Yezzi; Ofer Zeitouni (Statistics and Analysis of Shapes, 2006)

Medial Axis Computation and Evolution. - Sylvain Bouix; Kaleem Siddiqi; Allen R. Tannenbaum; Steven W. Zucker (Statistics and Analysis of Shapes, 2006)

Tracking deformable objects with unscented Kalman filtering and geometric active contours. - Samuel Dambreville; Yogesh Rathi; Allen R. Tannenbaum (ACC, 2006)

Time-varying Finite Dimensional Basis for Tracking Contour Deformations. - Namrata Vaswani; Anthony J. Yezzi; Yogesh Rathi; Allen R. Tannenbaum (CDC, 2006)

Shape-Based Approach to Robust Image Segmentation using Kernel PCA. - Samuel Dambreville; Yogesh Rathi; Allen R. Tannenbaum (CVPR (1), 2006)

Comparative Analysis of Kernel Methods for Statistical Shape Learning. - Yogesh Rathi; Samuel Dambreville; Allen R. Tannenbaum (CVAMIA, 2006)

3D Modeling of Patient-Specific Geometries of Portal Veins Using MR Images. - Yan Yang 004; Stephanie M. George; Diego R. Martín; Allen R. Tannenbaum; Don P. Giddens (EMBC, 2006)

Particle Filters for Infinite (or Large) Dimensional State Spaces- Part 1. - Namrata Vaswani; Anthony J. Yezzi; Yogesh Rathi; Allen R. Tannenbaum (ICASSP (3), 2006)

A Shape-Based Approach to Robust Image Segmentation. - Samuel Dambreville; Yogesh Rathi; Allen R. Tannenbaum (ICIAR (1), 2006)

Particle Filtering with Dynamic Shape Priors. - Yogesh Rathi; Samuel Dambreville; Allen R. Tannenbaum (ICIAR (1), 2006)

Deconvolution of medical ultrasound images via parametric inverse filtering. - Oleg V. Michailovich; Allen R. Tannenbaum (ISBI, 2006)

Shape-Driven 3D Segmentation Using Spherical Wavelets. - Delphine Nain; Steven Haker; Aaron F. Bobick; Allen R. Tannenbaum (MICCAI (1), 2006)

A dorsolateral prefrontal cortex semi-automatic segmenter. - Ramsey Al-Hakim; James Fallon; Delphine Nain; John Melonakos; Allen R. Tannenbaum (Image Processing, 2006)

Coronary vessel trees from 3D imagery: A topological approach. - Andrzej Szymczak; Arthur E. Stillman; Allen R. Tannenbaum; Konstantin Mischaikow (Medical Image Anal., 2006)

Dynamic active contours for visual tracking. - Marc Niethammer; Allen R. Tannenbaum; Sigurd B. Angenent (IEEE Trans. Autom. Control., 2006)

Statistical Analysis of RNA Backbone. - Eli Hershkovitz; Guillermo Sapiro; Allen R. Tannenbaum; Loren Dean Williams (IEEE ACM Trans. Comput. Biol. Bioinform., 2006)

On the detection of simple points in higher dimensions using cubical homology. - Marc Niethammer; William D. Kalies; Konstantin Mischaikow; Allen R. Tannenbaum (IEEE Trans. Image Process., 2006)

Real-time Visual Tracking Using Geometric Active Contours for the Navigation and Control of UAVs. - Jincheol Ha; Eric N. Johnson; Allen R. Tannenbaum (ACC, 2007)

A Variational Framework Combining Level-sets and Thresholding. - Samuel Dambreville; Marc Niethammer; Anthony J. Yezzi; Allen R. Tannenbaum (BMVC, 2007)

Tracking Through Clutter Using Graph Cuts. - James G. Malcolm; Yogesh Rathi; Allen R. Tannenbaum (BMVC, 2007)

Finsler Level Set Segmentation for Imagery in Oriented Domains. - Vandana Mohan; John Melonakos; Allen R. Tannenbaum; Marc Niethammer; Marek Kubicki (BMVC, 2007)

Layered Active Contours for Tracking. - Gallagher Pryor; Patricio A. Vela; Tauseef ur Rehman; Allen R. Tannenbaum (BMVC, 2007)

Fast Multigrid Optimal Mass Transport for Image Registration and Morphing. - Tauseef ur Rehman; Gallagher Pryor; Allen R. Tannenbaum (BMVC, 2007)

Fast Optimal Mass Transport for Dynamic Active Contour Tracking on the GPU. - Gallagher Pryor; Tauseef ur Rehman; Shawn Lankton; Patricio A. Vela; Allen R. Tannenbaum (CDC, 2007)

Multigrid optimal mass transport for image registration and morphing. - Tauseef ur Rehman; Allen R. Tannenbaum (Computational Imaging, 2007)

A Graph Cut Approach to Image Segmentation in Tensor Space. - James G. Malcolm; Yogesh Rathi; Allen R. Tannenbaum (CVPR, 2007)

Segmenting Images on the Tensor Manifold. - Yogesh Rathi; Allen R. Tannenbaum; Oleg V. Michailovich (CVPR, 2007)

Multi-Object Tracking Through Clutter Using Graph Cuts. - James G. Malcolm; Yogesh Rathi; Allen R. Tannenbaum (ICCV, 2007)

Locally-Constrained Region-Based Methods for DW-MRI Segmentation. - John Melonakos; Marc Niethammer; Vandana Mohan; Marek Kubicki; James V. Miller; Allen R. Tannenbaum (ICCV, 2007)

Graph Cut Segmentation with Nonlinear Shape Priors. - James G. Malcolm; Yogesh Rathi; Allen R. Tannenbaum (ICIP (4), 2007)

Segmentation of Medical Ultrasound Images using Active Contours. - Oleg V. Michailovich; Allen R. Tannenbaum (ICIP (5), 2007)

Statistical Shape Analysis of Brain Structures Using Spherical Wavelets. - Delphine Nain; Martin Andreas Styner; Marc Niethammer; James J. Levitt; Martha Elizabeth Shenton; Guido Gerig; Aaron F. Bobick; Allen R. Tannenbaum (ISBI, 2007)

Automatic Segmentation of Coronary Arteries Using Bayesian Driven Implicit Surfaces. - Yan Yang 004; Allen R. Tannenbaum; Don P. Giddens; Arthur E. Stillman (ISBI, 2007)

Finsler Tractography for White Matter Connectivity Analysis of the Cingulum Bundle. - John Melonakos; Vandana Mohan; Marc Niethammer; Kate Smith 002; Marek Kubicki; Allen R. Tannenbaum (MICCAI (1), 2007)

Semi-automatic parcellation of the corpus striatum. - Ramsey Al-Hakim; Delphine Nain; James J. Levitt; Martha Shenton; Allen R. Tannenbaum (Image Processing, 2007)

Tissue tracking: applications for brain MRI classification. - John Melonakos; Yi Gao 002; Allen R. Tannenbaum (Image Processing, 2007)

A variational segmentation framework using active contours and thresholding. - Samuel Dambreville; Marc Niethammer; Anthony J. Yezzi; Allen R. Tannenbaum (SIP, 2007)

Tracking Deforming Objects Using Particle Filtering for Geometric Active Contours. - Yogesh Rathi; Namrata Vaswani; Allen R. Tannenbaum; Anthony J. Yezzi (IEEE Trans. Pattern Anal. Mach. Intell., 2007)

Image Segmentation Using Active Contours Driven by the Bhattacharyya Gradient Flow. - Oleg V. Michailovich; Yogesh Rathi; Allen R. Tannenbaum (IEEE Trans. Image Process., 2007)

Blind Deconvolution of Medical Ultrasound Images: A Parametric Inverse Filtering Approach. - Oleg V. Michailovich; Allen R. Tannenbaum (IEEE Trans. Image Process., 2007)

A Generic Framework for Tracking Using Particle Filter With Dynamic Shape Prior. - Yogesh Rathi; Namrata Vaswani; Allen R. Tannenbaum (IEEE Trans. Image Process., 2007)

An Image Morphing Technique Based on Optimal Mass Preserving Mapping. - Lei Zhu 001; Yan Yang 004; Steven Haker; Allen R. Tannenbaum (IEEE Trans. Image Process., 2007)

Multiscale 3-D Shape Representation and Segmentation Using Spherical Wavelets. - Delphine Nain; Steven Haker; Aaron F. Bobick; Allen R. Tannenbaum (IEEE Trans. Medical Imaging, 2007)

On the Computation of Optimal Transport Maps Using Gradient Flows and Multiresolution Analysis. - Ayelet Dominitz; Sigurd B. Angenent; Allen R. Tannenbaum (Recent Advances in Learning and Control, 2008)

Particle filtering using multiple cross-correlations for tracking occluded objects in cluttered scenes. - Arie Nakhmani; Allen R. Tannenbaum (CDC, 2008)

Localized statistics for DW-MRI fiber bundle segmentation. - Shawn Lankton; John Melonakos; James G. Malcolm; Samuel Dambreville; Allen R. Tannenbaum (CVPR Workshops, 2008)

Particle filtering for registration of 2D and 3D point sets with stochastic dynamics. - Romeil Sandhu; Samuel Dambreville; Allen R. Tannenbaum (CVPR, 2008)

Robust 3D Pose Estimation and Efficient 2D Region-Based Segmentation from a 3D Shape Prior. - Samuel Dambreville; Romeil Sandhu; Anthony J. Yezzi; Allen R. Tannenbaum (ECCV (2), 2008)

TAC: Thresholding active contours. - Samuel Dambreville; Anthony J. Yezzi; Shawn Lankton; Allen R. Tannenbaum (ICIP, 2008)

Kernel-based high-dimensional histogram estimation for visual tracking. - Peter Karasev; James G. Malcolm; Allen R. Tannenbaum (ICIP, 2008)

Tracking through changes in scale. - Shawn Lankton; James G. Malcolm; Arie Nakhmani; Allen R. Tannenbaum (ICIP, 2008)

Label Space: A Multi-object Shape Representation. - James G. Malcolm; Yogesh Rathi; Allen R. Tannenbaum (IWCIA, 2008)

Label Space: A Coupled Multi-shape Representation. - James G. Malcolm; Yogesh Rathi; Martha Elizabeth Shenton; Allen R. Tannenbaum (MICCAI (2), 2008)

Fast approximate surface evolution in arbitrary dimension. - James G. Malcolm; Yogesh Rathi; Anthony J. Yezzi; Allen R. Tannenbaum (Image Processing, 2008)

Segmenting images analytically in shape space. - Yogesh Rathi; Samuel Dambreville; Marc Niethammer; James G. Malcolm; James J. Levitt; Martha Elizabeth Shenton; Allen R. Tannenbaum (Image Processing, 2008)

A new distribution metric for image segmentation. - Romeil Sandhu; Tryphon T. Georgiou; Allen R. Tannenbaum (Image Processing, 2008)

Improved tracking by decoupling camera and target motion. - Shawn Lankton; Allen R. Tannenbaum (Real-Time Image Processing, 2008)

Fast approximate curve evolution. - James G. Malcolm; Yogesh Rathi; Anthony J. Yezzi; Allen R. Tannenbaum (Real-Time Image Processing, 2008)

Real-Time Visual Tracking Using Geometric Active Contours and Particle Filters. - Jincheol Ha; Eric N. Johnson; Allen R. Tannenbaum (J. Aerosp. Comput. Inf. Commun., 2008)

A Framework for Image Segmentation Using Shape Models and Kernel Space Shape Priors. - Samuel Dambreville; Yogesh Rathi; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 2008)

Finsler Active Contours. - John Melonakos; Eric Pichon; Sigurd B. Angenent; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 2008)

Geometric Observers for Dynamically Evolving Curves. - Marc Niethammer; Patricio A. Vela; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 2008)

On approximation of smooth functions from samples of partial derivatives with application to phase unwrapping. - Oleg V. Michailovich; Allen R. Tannenbaum (Signal Process., 2008)

Knowledge-Based Segmentation for Tracking Through Deep Turbulence. - Patricio A. Vela; Marc Niethammer; Gallagher Pryor; Allen R. Tannenbaum; Robert Butts; Donald Washburn (IEEE Trans. Control. Syst. Technol., 2008)

Localizing Region-Based Active Contours. - Shawn Lankton; Allen R. Tannenbaum (IEEE Trans. Image Process., 2008)

Dynamic Denoising of Tracking Sequences. - Oleg V. Michailovich; Allen R. Tannenbaum (IEEE Trans. Image Process., 2008)

Segmentation of Tracking Sequences Using Dynamically Updated Adaptive Learning. - Oleg V. Michailovich; Allen R. Tannenbaum (IEEE Trans. Image Process., 2008)

Guest Editorial Introduction to the Special Section on Computer Vision for Intravascular and Intracardiac Imaging. - Gozde B. Unal; Gregory G. Slabaugh; Ioannis A. Kakadiaris; Allen R. Tannenbaum (IEEE Trans. Inf. Technol. Biomed., 2008)

Statistical shape learning for 3D tracking. - Romeil Sandhu; Shawn Lankton; Samuel Dambreville; Allen R. Tannenbaum (CDC, 2009)

Non-rigid 2D-3D pose estimation and 2D image segmentation. - Romeil Sandhu; Samuel Dambreville; Anthony J. Yezzi; Allen R. Tannenbaum (CVPR, 2009)

Segmentation of Facial Expressions Using Semi-Definite Programming and Generalized Principal Component Analysis - Behnood Gholami; Allen R. Tannenbaum; Wassim M. Haddad 001 (CoRR, 2009)

3D nonrigid registration via optimal mass transport on the GPU. - Tauseef ur Rehman; Eldad Haber; Gallagher Pryor; John Melonakos; Allen R. Tannenbaum (Medical Image Anal., 2009)

Near-tubular fiber bundle segmentation for diffusion weighted imaging: Segmentation through frame reorientation. - Marc Niethammer; Christopher Zach; John Melonakos; Allen R. Tannenbaum (NeuroImage, 2009)

Vision-Based Range Regulation of a Leader-Follower Formation. - Patricio A. Vela; Amir Betser; James G. Malcolm; Allen R. Tannenbaum (IEEE Trans. Control. Syst. Technol., 2009)

Visual closed-loop tracking with area stabilization. - Peter Karasev; Miguel Moises Serrano; Patricio A. Vela; Allen R. Tannenbaum (ACC, 2010)

Closed-loop control for cardiopulmonary management and intensive care unit sedation using expert systems. - Behnood Gholami; James M. Bailey; Wassim M. Haddad 001; Allen R. Tannenbaum (CDC, 2010)

Optimal drug dosing control for intensive care unit sedation using a hybrid deterministic-stochastic pharmacokinetic and pharmacodynamic model. - Behnood Gholami; Wassim M. Haddad 001; James M. Bailey; Allen R. Tannenbaum (CDC, 2010)

Delay estimation for wireless LAN control of nonlinear systems. - Peter Karasev; Patricio A. Vela; Allen R. Tannenbaum (CDC, 2010)

Separation of system dynamics and line spectra via sparse representation. - Lipeng Ning; Tryphon T. Georgiou; Allen R. Tannenbaum (CDC, 2010)

Signals and control aspects of optimal mass transport and the Boltzmann entropy. - Emmanuel Tannenbaum; Tryphon T. Georgiou; Allen R. Tannenbaum (CDC, 2010)

Fire and smoke detection in video with optimal mass transport based optical flow and neural networks. - Ivan Kolesov; Peter Karasev; Allen R. Tannenbaum; Eldad Haber (ICIP, 2010)

Range based object tracking and segmentation. - Jehoon Lee; Peter Karasev; Allen R. Tannenbaum (ICIP, 2010)

An unsupervised learning approach for facial expression recognition using semi-definite programming and generalized principal component analysis. - Behnood Gholami; Wassim M. Haddad 001; Allen R. Tannenbaum (Image Processing: Algorithms and Systems, 2010)

Population analysis of the cingulum bundle using the tubular surface model for schizophrenia detection. - Vandana Mohan; Ganesh Sundaramoorthi; Marek Kubicki; Douglas P. Terry; Allen R. Tannenbaum (Computer-Aided Diagnosis, 2010)

Simultaneous Multi-object Segmentation Using Local Robust Statistics and Contour Interaction. - Yi Gao 002; Allen R. Tannenbaum; Ron Kikinis (MCV, 2010)

User-driven 3D mesh region targeting. - Peter Karasev; James G. Malcolm; Marc Niethammer; Ron Kikinis; Allen R. Tannenbaum (Image-Guided Procedures, 2010)

Segmentation of the endocardial wall of the left atrium using local region-based active contours and statistical shape learning. - Yi Gao 002; Behnood Gholami; Robert S. MacLeod; Joshua Blauer; Wassim M. Haddad 001; Allen R. Tannenbaum (Image Processing, 2010)

Fast Hamilton-Jacobi equation solver and neural fiber bundle extraction. - Yi Gao 002; John Melonakos; Allen R. Tannenbaum (Image Processing, 2010)

Image processing and registration in a point set representation. - Yi Gao 002; Allen R. Tannenbaum (Image Processing, 2010)

Shape based MRI prostate image segmentation using local information driven directional distance Bayesian method. - Yi Gao 002; Allen R. Tannenbaum (Image Processing, 2010)

'Active contour without edges', on parametric manifolds. - Yi Gao 002; Allen R. Tannenbaum (Image Processing, 2010)

Point Set Registration via Particle Filtering and Stochastic Dynamics. - Romeil Sandhu; Samuel Dambreville; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 2010)

A Geometric Approach to Joint 2D Region-Based Segmentation and 3D Pose Estimation Using a 3D Shape Prior. - Samuel Dambreville; Romeil Sandhu; Anthony J. Yezzi; Allen R. Tannenbaum (SIAM J. Imaging Sci., 2010)

An Efficient Numerical Method for the Solution of the L2 Optimal Mass Transfer Problem. - Eldad Haber; Tauseef ur Rehman; Allen R. Tannenbaum (SIAM J. Sci. Comput., 2010)

Relevance Vector Machine Learning for Neonate Pain Intensity Assessment Using Digital Imaging. - Behnood Gholami; Wassim M. Haddad 001; Allen R. Tannenbaum (IEEE Trans. Biomed. Eng., 2010)

Deform PF-MT: Particle Filter With Mode Tracker for Tracking Nonaffine Contour Deformations. - Namrata Vaswani; Yogesh Rathi; Anthony J. Yezzi; Allen R. Tannenbaum (IEEE Trans. Image Process., 2010)

A Coupled Global Registration and Segmentation Framework With Application to Magnetic Resonance Prostate Imagery. - Yi Gao 002; Romeil Sandhu; Gabor Fichtinger; Allen R. Tannenbaum (IEEE Trans. Medical Imaging, 2010)

Tubular Surface Segmentation for Extracting Anatomical Structures From Medical Imagery. - Vandana Mohan; Ganesh Sundaramoorthi; Allen R. Tannenbaum (IEEE Trans. Medical Imaging, 2010)

Texture Mapping via Optimal Mass Transport. - Ayelet Dominitz; Allen R. Tannenbaum (IEEE Trans. Vis. Comput. Graph., 2010)

A robust aim point tracking algorithm for 3-D laser radar imagery. - Romeil Sandhu; Shawn Lankton; Samuel Dambreville; Scot Shaw; Dan Murphy; Allen R. Tannenbaum (ACC, 2011)

Interactive MRI segmentation with controlled active vision. - Peter Karasev; Ivan Kolesov; Karol Chudy; Allen R. Tannenbaum; Grant Muller; John W. Xerogeanes (CDC/ECC, 2011)

Depth invariant visual servoing. - Peter Karasev; Miguel Moises Serrano; Patricio A. Vela; Allen R. Tannenbaum (CDC/ECC, 2011)

A compressive sensing approach for glioma margin delineation using mass spectrometry. - Behnood Gholami; Nathalie Y. R. Agar; Ferenc A. Jolesz; Wassim M. Haddad 001; Allen R. Tannenbaum (EMBC, 2011)

Classification of astrocytomas and oligodendrogliomas from mass spectrometry data using sparse kernel machines. - Jacob Huang; Behnood Gholami; Nathalie Y. R. Agar; Isaiah Norton; Wassim M. Haddad 001; Allen R. Tannenbaum (EMBC, 2011)

Monte Carlo sampling for visual pose tracking. - Jehoon Lee; Romeil Sandhu; Allen R. Tannenbaum (ICIP, 2011)

A video analytics framework for amorphous and unstructured anomaly detection. - Martin Mueller; Peter Karasev; Ivan Kolesov; Allen R. Tannenbaum (ICIP, 2011)

Temporal registration of partial data using particle filtering. - Guy Nir; Allen R. Tannenbaum (ICIP, 2011)

Combining atlas and active contour for automatic 3D medical image segmentation. - Yi Gao 002; Allen R. Tannenbaum (ISBI, 2011)

Estimation of myocardial volume at risk from CT angiography. - Liangjia Zhu; Yi Gao 002; Vandana Mohan; Arthur E. Stillman; Tracy L. Faber; Allen R. Tannenbaum (Computer-Aided Diagnosis, 2011)

Human Body Tracking and Joint Angle Estimation from Mobile-phone Video for Clinical Analysis. - Jehoon Lee; Peter Karasev; Liangjia Zhu; Allen R. Tannenbaum (MVA, 2011)

A Nonrigid Kernel-Based Framework for 2D-3D Pose Estimation and 2D Image Segmentation. - Romeil Sandhu; Samuel Dambreville; Anthony J. Yezzi; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 2011)

Particle Filtering with Region-based Matching for Tracking of Partially Occluded and Scaled Targets. - Arie Nakhmani; Allen R. Tannenbaum (SIAM J. Imaging Sci., 2011)

Nonparametric Clustering for Studying RNA Conformations. - Xavier Le Faucheur; Eli Hershkovitz; Rina Tannenbaum; Allen R. Tannenbaum (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

Object Tracking and Target Reacquisition Based on 3-D Range Data for Moving Vehicles. - Jehoon Lee; Shawn Lankton; Allen R. Tannenbaum (IEEE Trans. Image Process., 2011)

Recursive feature elimination for brain tumor classification using desorption electrospray ionization mass spectrometry imaging. - Behnood Gholami; Isaiah Norton; Allen R. Tannenbaum; Nathalie Y. R. Agar (EMBC, 2012)

Automatic segmentation of the left atrium from MRI images using salient feature and contour evolution. - Liangjia Zhu; Yi Gao 002; Anthony J. Yezzi; Robert S. MacLeod; Joshua Cates; Allen R. Tannenbaum (EMBC, 2012)

Volumetric Mapping of Genus Zero Objects via Mass Preservation - Romeil Sandhu; Ayelet Dominitz; Yi Gao 002; Allen R. Tannenbaum (CoRR, 2012)

Multiscale 3D shape representation and segmentation with applications to hippocampal/caudate extraction from brain MRI. - Yi Gao 002; Benjamin Corn; Dan Schifter; Allen R. Tannenbaum (Medical Image Anal., 2012)

A 3D interactive multi-object segmentation tool using local robust statistics driven active contours. - Yi Gao 002; Ron Kikinis; Sylvain Bouix; Martha Elizabeth Shenton; Allen R. Tannenbaum (Medical Image Anal., 2012)

Clinical Decision Support and Closed-Loop Control for Cardiopulmonary Management and Intensive Care Unit Sedation Using Expert Systems. - Behnood Gholami; James M. Bailey; Wassim M. Haddad 001; Allen R. Tannenbaum (IEEE Trans. Control. Syst. Technol., 2012)

Filtering in the Diffeomorphism Group and the Registration of Point Sets. - Yi Gao 002; Yogesh Rathi; Sylvain Bouix; Allen R. Tannenbaum (IEEE Trans. Image Process., 2012)

Self-Crossing Detection and Location for Parametric Active Contours. - Arie Nakhmani; Allen R. Tannenbaum (IEEE Trans. Image Process., 2012)

Anomaly detection in videos: A dynamical systems approach. - Amit Surana; Arie Nakhmani; Allen R. Tannenbaum (CDC, 2013)

A stochastic approach for non-rigid image registration. - Ivan Kolesov; Jehoon Lee; Patricio A. Vela; Allen R. Tannenbaum (Image Processing: Algorithms and Systems, 2013)

Stochastic image registration with user constraints. - Ivan Kolesov; Jehoon Lee; Patricio A. Vela; Allen R. Tannenbaum (Image Processing, 2013)

IMU-compensated image segmentation for improved vision-based control performance. - Peter Karasev; Patricio A. Vela; Allen R. Tannenbaum (SysCon, 2013)

Particle filters and occlusion handling for rigid 2D-3D pose tracking. - Jehoon Lee; Romeil Sandhu; Allen R. Tannenbaum (Comput. Vis. Image Underst., 2013)

Joint CT/CBCT deformable registration and CBCT enhancement for cancer radiotherapy. - Yifei Lou; Tianye Niu; Xun Jia; Patricio A. Vela; Lei Zhu 001; Allen R. Tannenbaum (Medical Image Anal., 2013)

A new distance measure based on generalized Image Normalized Cross-Correlation for robust video tracking and image recognition. - Arie Nakhmani; Allen R. Tannenbaum (Pattern Recognit. Lett., 2013)

Multimodal Deformable Registration of Traumatic Brain Injury MR Volumes via the Bhattacharyya Distance. - Yifei Lou; Andrei Irimia; Patricio A. Vela; Micah C. Chambers; John D. Van Horn; Paul M. Vespa; Allen R. Tannenbaum (IEEE Trans. Biomed. Eng., 2013)

Automatic Delineation of the Myocardial Wall From CT Images Via Shape Segmentation and Variational Region Growing. - Liangjia Zhu; Yi Gao 002; Vikram V. Appia; Anthony J. Yezzi; Chesnal D. Arepalli; Tracy L. Faber; Arthur E. Stillman; Allen R. Tannenbaum (IEEE Trans. Biomed. Eng., 2013)

Sparse Texture Active Contour. - Yi Gao 002; Sylvain Bouix; Martha Elizabeth Shenton; Allen R. Tannenbaum (IEEE Trans. Image Process., 2013)

Optical Flow Estimation for Flame Detection in Videos. - Martin Mueller; Peter Karasev; Ivan Kolesov; Allen R. Tannenbaum (IEEE Trans. Image Process., 2013)

Automatic Segmentation of the Left Atrium From MR Images via Variational Region Growing With a Moments-Based Shape Prior. - Liangjia Zhu; Yi Gao 002; Anthony J. Yezzi; Allen R. Tannenbaum (IEEE Trans. Image Process., 2013)

Interactive Medical Image Segmentation Using PDE Control of Active Contours. - Peter Karasev; Ivan Kolesov; Karl D. Fritscher; Patricio A. Vela; Phillip Mitchell; Allen R. Tannenbaum (IEEE Trans. Medical Imaging, 2013)

Macroscopic analysis of crowd motion in video sequences. - Arie Nakhmani; Amit Surana; Allen R. Tannenbaum (CDC, 2014)

Reconstruction and feature selection for desorption electrospray ionization mass spectroscopy imagery. - Yi Gao 002; Liangjia Zhu; Isaiah Norton; Nathalie Y. R. Agar; Allen R. Tannenbaum (Image-Guided Procedures, 2014)

A framework for joint image-and-shape analysis. - Yi Gao 002; Allen R. Tannenbaum; Sylvain Bouix (Image Processing, 2014)

Interpolation of longitudinal shape and image data via optimal mass transport. - Yi Gao 002; Liangjia Zhu; Sylvain Bouix; Allen R. Tannenbaum (Image Processing, 2014)

MRI brain tumor segmentation and necrosis detection using adaptive Sobolev snakes. - Arie Nakhmani; Ron Kikinis; Allen R. Tannenbaum (Image Processing, 2014)

A Complete System for Automatic Extraction of Left Ventricular Myocardium From CT Images Using Shape Segmentation and Contour Evolution. - Liangjia Zhu; Yi Gao 002; Vikram V. Appia; Anthony J. Yezzi; Chesnal D. Arepalli; Tracy L. Faber; Arthur E. Stillman; Allen R. Tannenbaum (IEEE Trans. Image Process., 2014)

Numerical Methods in Curve Evolution Theory. - Peter Karasev; Ivan Kolesov; Allen R. Tannenbaum (Computer Vision, A Reference Guide, 2014)

Optimal-mass-transfer-based estimation of glymphatic transport in living brain. - Vadim Ratner; Liangjia Zhu; Ivan Kolesov; Maiken Nedergaard; Helene Benveniste; Allen R. Tannenbaum (Image Processing, 2015)

Interactive image segmentation framework based on control theory. - Liangjia Zhu; Ivan Kolesov; Vadim Ratner; Peter Karasev; Allen R. Tannenbaum (Image Processing, 2015)

A Kalman Filtering Perspective for Multiatlas Segmentation. - Yi Gao 002; Liangjia Zhu; Joshua Cates; Rob S. MacLeod; Sylvain Bouix; Allen R. Tannenbaum (SIAM J. Imaging Sci., 2015)

Linear Models Based on Noisy Data and the Frisch Scheme. - Lipeng Ning; Tryphon T. Georgiou; Allen R. Tannenbaum; Stephen P. Boyd (SIAM Rev., 2015)

On Matrix-Valued Monge-Kantorovich Optimal Mass Transport. - Lipeng Ning; Tryphon T. Georgiou; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2015)

Transcriptional responses to ultraviolet and ionizing radiation: An approach based on graph curvature. - Yongxin Chen; Jung Hun Oh; Romeil Sandhu; Sangkyu Lee; Joseph O. Deasy; Allen R. Tannenbaum (BIBM, 2016)

A new approach to robust transportation over networks. - Yongxin Chen; Tryphon T. Georgiou; Michele Pavon; Allen R. Tannenbaum (CDC, 2016)

Geometry of correlation networks for studying the biology of cancer. - Romeil Sandhu; Sarah Tannenbaum; Tryphon T. Georgiou; Allen R. Tannenbaum (CDC, 2016)

Multi-scale learning based segmentation of glands in digital colonrectal pathology images. - Yi Gao 002; William Liu; Shipra Arjun; Liangjia Zhu; Vadim Ratner; Tahsin M. Kurç; Joel H. Saltz; Allen R. Tannenbaum (Digital Pathology, 2016)

Hierarchical nucleus segmentation in digital pathology images. - Yi Gao 002; Vadim Ratner; Liangjia Zhu; Tammy Diprima; Tahsin M. Kurç; Allen R. Tannenbaum; Joel H. Saltz (Digital Pathology, 2016)

Transport Distance on Graphs and Vector-Valued Optimal Mass Transport. - Yongxin Chen; Tryphon T. Georgiou; Allen R. Tannenbaum (CoRR, 2016)

Interactive Image Segmentation From A Feedback Control Perspective. - Liangjia Zhu; Peter Karasev; Ivan Kolesov; Romeil Sandhu; Allen R. Tannenbaum (CoRR, 2016)

A Stochastic Approach to Diffeomorphic Point Set Registration with Landmark Constraints. - Ivan Kolesov; Jehoon Lee; Gregory C. Sharp; Patricio A. Vela; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 2016)

Evaluation of nucleus segmentation in digital pathology images through large scale image synthesis. - Naiyun Zhou; Xiaxia Yu; Tianhao Zhao; Si Wen; Fusheng Wang 001; Wei Zhu 008; Tahsin M. Kurç; Allen R. Tannenbaum; Joel H. Saltz; Yi Gao 002 (Digital Pathology, 2017)

Sulci segmentation using geometric active contours. - Mahsa Torkaman; Liangjia Zhu; Peter Karasev; Allen R. Tannenbaum (Image Processing, 2017)

Matricial Wasserstein-1 Distance. - Yongxin Chen; Tryphon T. Georgiou; Lipeng Ning; Allen R. Tannenbaum (IEEE Control. Syst. Lett., 2017)

Cerebrospinal and interstitial fluid transport via the glymphatic pathway modeled by optimal mass transport. - Vadim Ratner; Yi Gao 002; Hedok Lee; Rena Elkin; Maiken Nedergaard; Helene Benveniste; Allen R. Tannenbaum (NeuroImage, 2017)

Robust Transport Over Networks. - Yongxin Chen; Tryphon T. Georgiou; Michele Pavon; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2017)

Interpretable Spiculation Quantification for Lung Cancer Screening. - Wookjin Choi; Saad Nadeem; Sadegh Riyahi; Joseph O. Deasy; Allen R. Tannenbaum; Wei Lu 025 (ShapeMI@MICCAI, 2018)

GlymphVIS: Visualizing Glymphatic Transport Pathways Using Regularized Optimal Transport. - Rena Elkin; Saad Nadeem; Eldad Haber; Klara Steklova; Hedok Lee; Helene Benveniste; Allen R. Tannenbaum (MICCAI (1), 2018)

Extraction of breast lesions from ultrasound imagery: Bhattacharyya gradient flow approach. - Mahsa Torkaman; Romeil Sandhu; Allen R. Tannenbaum (Image Processing, 2018)

Stochastic control and non-equilibrium thermodynamics: fundamental limits. - Yongxin Chen; Tryphon T. Georgiou; Allen R. Tannenbaum (CoRR, 2018)

Affine Differential Invariants for Invariant Feature Point Detection. - Stanley L. Tuznik; Peter J. Olver; Allen R. Tannenbaum (CoRR, 2018)

An Efficient Algorithm for Matrix-Valued and Vector-Valued Optimal Mass Transport. - Yongxin Chen; Eldad Haber; Kaoru Yamamoto; Tryphon T. Georgiou; Allen R. Tannenbaum (J. Sci. Comput., 2018)

Vector-Valued Optimal Mass Transport. - Yongxin Chen; Tryphon T. Georgiou; Allen R. Tannenbaum (SIAM J. Appl. Math., 2018)

Efficient Robust Routing for Single Commodity Network Flows. - Yongxin Chen; Tryphon T. Georgiou; Michele Pavon; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2018)

Matrix Optimal Mass Transport: A Quantum Mechanical Approach. - Yongxin Chen; Tryphon T. Georgiou; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2018)

Regularization and Interpolation of Positive Matrices. - Kaoru Yamamoto; Yongxin Chen; Lipeng Ning; Tryphon T. Georgiou; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2018)

Guiding Image Segmentation on the Fly: Interactive Segmentation From a Feedback Control Perspective. - Liangjia Zhu; Peter Karasev; Ivan Kolesov; Romeil Sandhu; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2018)

Controlled and Uncontrolled Stochastic Norton-Simon-Massagué Tumor Growth Models. - Zehor Belkhatir; Michele Pavon; James C. Mathews; Maryam Pouryahya; Joseph O. Deasy; Larry Norton; Allen R. Tannenbaum (CDC, 2019)

Optimal Transport for Gaussian Mixture Models. - Yongxin Chen; Tryphon T. Georgiou; Allen R. Tannenbaum (IEEE Access, 2019)

Probabilistic Kernel Support Vector Machines. - Yongxin Chen; Tryphon T. Georgiou; Allen R. Tannenbaum (CoRR, 2019)

Kernel Wasserstein Distance. - Jung Hun Oh; Maryam Pouryahya; Aditi Iyer; Aditya P. Apte; Allen R. Tannenbaum; Joseph O. Deasy (CoRR, 2019)

Fisher-Rao Regularized Transport Analysis of the Glymphatic System and Waste Drainage. - Rena Elkin; Saad Nadeem; Hedok Lee; Helene Benveniste; Allen R. Tannenbaum (MICCAI (7), 2020)

Multimarginal Wasserstein Barycenter for Stain Normalization and Augmentation. - Saad Nadeem; Travis J. Hollmann; Allen R. Tannenbaum (MICCAI (5), 2020)

A Vectorial Approach to Unbalanced Optimal Mass Transport. - Jiening Zhu; Rena Elkin; Jung Hun Oh; Joseph O. Deasy; Allen R. Tannenbaum (IEEE Access, 2020)

A novel kernel Wasserstein distance on Gaussian measures: An application of identifying dental artifacts in head and neck computed tomography. - Jung Hun Oh; Maryam Pouryahya; Aditi Iyer; Aditya P. Apte; Joseph O. Deasy; Allen R. Tannenbaum (Comput. Biol. Medicine, 2020)

Optimal transport for vector Gaussian mixture models. - Jiening Zhu; Kaiming Xu; Allen R. Tannenbaum (CoRR, 2020)

Stochastic Control and Nonequilibrium Thermodynamics: Fundamental Limits. - Yongxin Chen; Tryphon T. Georgiou; Allen R. Tannenbaum (IEEE Trans. Autom. Control., 2020)

Relaxed Schrödinger Bridges and Robust Network Routing. - Yongxin Chen; Tryphon T. Georgiou; Michele Pavon; Allen R. Tannenbaum (IEEE Trans. Control. Netw. Syst., 2020)

PathCNN: interpretable convolutional neural networks for survival prediction and pathway analysis applied to glioblastoma. - Jung Hun Oh; Wookjin Choi; Euiseong Ko; Mingon Kang; Allen R. Tannenbaum; Joseph O. Deasy (Bioinform., 2021)

Reproducible and Interpretable Spiculation Quantification for Lung Cancer Screening. - Wookjin Choi; Saad Nadeem; Sadegh R. Alam; Joseph O. Deasy; Allen R. Tannenbaum; Wei Lu 025 (Comput. Methods Programs Biomed., 2021)

Stochastic Norton-Simon-Massagué Tumor Growth Modeling: Controlled and Mixed-Effect Uncontrolled Analysis. - Zehor Belkhatir; Michele Pavon; James C. Mathews; Maryam Pouryahya; Joseph O. Deasy; Larry Norton; Allen R. Tannenbaum (IEEE Trans. Control. Syst. Technol., 2021)

The maximum entropy principle for compositional data. - Corey Weistuch; Jiening Zhu; Joseph O. Deasy; Allen R. Tannenbaum (BMC Bioinform., 2022)

Wasserstein-based texture analysis in radiomic studies. - Zehor Belkhatir; Raúl San José Estépar; Allen R. Tannenbaum (Comput. Medical Imaging Graph., 2022)

aWCluster: A Novel Integrative Network-Based Clustering of Multiomics for Subtype Analysis of Cancer Data. - Maryam Pouryahya; Jung Hun Oh; Pedram Javanmard; James C. Mathews; Zehor Belkhatir; Joseph O. Deasy; Allen R. Tannenbaum (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Unbalanced Regularized Optimal Mass Transport with Applications to Fluid Flows in the Brain. - Xinan Chen; Helene Benveniste; Allen R. Tannenbaum (CoRR, 2023)

Negative probabilities in Gene Regulatory Networks. - Anqi Dong; Tryphon T. Georgiou; Allen R. Tannenbaum (CoRR, 2023)

Optimal Transport for Kernel Gaussian Mixture Models. - Jung Hun Oh; Rena Elkin; Anish Kumar Simhal; Jiening Zhu; Joseph O. Deasy; Allen R. Tannenbaum (CoRR, 2023)

Computational Optimal Transport and Filtering on Riemannian Manifolds. - Daniel Grange; Mohammad Al-Jarrah; Ricardo Baptista; Amirhossein Taghvaei; Tryphon T. Georgiou; Sean Phillips; Allen R. Tannenbaum (IEEE Control. Syst. Lett., 2023)

Volume Exploration Using Multidimensional Bhattacharyya Flow. - Shreeraj Jadhav; Mahsa Torkaman; Allen R. Tannenbaum; Saad Nadeem; Arie E. Kaufman (IEEE Trans. Vis. Comput. Graph., 2023)

Geometric graph neural networks on multi-omics data to predict cancer survival outcomes. - Jiening Zhu; Jung Hun Oh; Anish K. Simhal; Rena Elkin; Larry Norton; Joseph O. Deasy; Allen R. Tannenbaum (Comput. Biol. Medicine, 2023)

Visualizing Fluid Flows via Regularized Optimal Mass Transport with Applications to Neuroscience. - Xinan Chen; Anh Phong Tran; Rena Elkin; Helene Benveniste; Allen R. Tannenbaum (J. Sci. Comput., 2023)

Distributed Nonlinear Filtering using Triangular Transport Maps. - Daniel Grange; Ricardo Baptista; Amirhossein Taghvaei; Allen R. Tannenbaum; Sean Phillips (ACC, 2024)

From Geometry to Causality- Ricci Curvature and the Reliability of Causal Inference on Networks. - Amirhossein Farzam; Allen R. Tannenbaum; Guillermo Sapiro (ICML, 2024)

Multi-omic integrated curvature study on pan-cancer genomic data. - Jiening Zhu; Anh Phong Tran; Joseph O. Deasy; Allen R. Tannenbaum (Math. Control. Signals Syst., 2024)

Wasserstein HOG: Local Directionality Extraction via Optimal Transport. - Jiening Zhu; Harini Veeraraghavan; Jue Jiang; Jung Hun Oh; Larry Norton; Joseph O. Deasy; Allen R. Tannenbaum (IEEE Trans. Medical Imaging, 2024)

Data Assimilation for Sign-indefinite Priors: A generalization of Sinkhorn's algorithm. - Anqi Dong; Tryphon T. Georgiou; Allen R. Tannenbaum (Autom., 2025)