Allen W. Zhang

According to our database, Allen W. Zhang authored at least 6 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

GRASP: GRAph-Structured Pyramidal Whole Slide Image Representation.

Ali Khajegili Mirabadi, Graham Archibald, Amirali Darbandsari, Alberto Contreras-Sanz, Ramin Ebrahim Nakhli, Maryam Asadi, Allen Zhang, C. Blake Gilks, Peter Black, Gang Wang, Hossein Farahani, Ali Bashashati

CoRR, 2024

2023

VOLTA: an Environment-Aware Contrastive Cell Representation Learning for Histopathology.

Ramin Nakhli, Allen Zhang, Hossein Farahani, Amirali Darbandsari, Elahe Shenasa, Sidney Thiessen, Katy Milne, Jessica McAlpine, Brad Nelson, C. Blake Gilks, Ali Bashashati

CoRR, 2023

CO-PILOT: Dynamic Top-Down Point Cloud with Conditional Neighborhood Aggregation for Multi-Gigapixel Histopathology Image Representation.

Ramin Nakhli, Allen W. Zhang, Ali Khajegili Mirabadi, Katherine Rich, Maryam Asadi, C. Blake Gilks, Hossein Farahani, Ali Bashashati

Proceedings of the IEEE/CVF International Conference on Computer Vision, 2023

2019

Integrated structural variation and point mutation signatures in cancer genomes using correlated topic models.

Tyler Funnell, Allen W. Zhang, Diljot Grewal, Steven McKinney, Ali Bashashati, Yi Kan Wang, Sohrab P. Shah

PLoS Comput. Biol., 2019

2016

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles.

Anthony Mathelier, Oriol Fornes, David J. Arenillas, Chih-Yu Chen, Grégoire Denay, Jessica J. Y. Lee, Wenqiang Shi, Casper Shyr, Ge Tan, Rebecca Worsley-Hunt, Allen W. Zhang, François Parcy, Boris Lenhard, Albin Sandelin, Wyeth W. Wasserman

Nucleic Acids Res., 2016

2014

JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles.

Anthony Mathelier, Xiaobei Zhao, Allen W. Zhang, François Parcy, Rebecca Worsley-Hunt, David J. Arenillas, Sorana Buchman, Chih-Yu Chen, Alice Yi Chou, Hans Ienasescu, Jonathan S. Lim, Casper Shyr, Ge Tan, Michelle Zhou, Boris Lenhard, Albin Sandelin, Wyeth W. Wasserman

Nucleic Acids Res., 2014