Establishment and cryptic transmission of Zika virus in Brazil and the Americas. - Nuno R. Faria; Joshua Quick; I. M. Claro; Julien Thézé; J. G. de Jesus; Marta Giovanetti; Moritz U. G. Kraemer; S. C. Hill; Allison Black; A. C. Da Costa; L. C. Franco; S. P. Silva; et al. (Nat., 2017)

SMM4H Shared Task 2020 - A Hybrid Pipeline for Identifying Prescription Drug Abuse from Twitter: Machine Learning, Deep Learning, and Post-Processing. - Isabel Metzger; Emir Y. Haskovic; Allison Black; Whitley M. Yi; Rajat S. Chandra; Mark T. Rutledge; William McMahon; Yindalon Aphinyanaphongs (SMM4H@COLING, 2020)

dms-view: Interactive visualization tool for deep mutational scanning data. - Sarah Hilton; John Huddleston; Allison Black; Khrystyna North; Adam S. Dingens; Trevor Bedford; Jesse D. Bloom (J. Open Source Softw., 2020)

Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition. - Jover Lee; James Hadfield; Allison Black; Thomas R. Sibley; Richard A. Neher; Trevor Bedford; John Huddleston (Frontiers Bioinform., 2023)