Extremal Optimization: Methods derived from Co-Evolution. - Stefan Boettcher; Allon G. Percus (GECCO, 1999)

Greedy Algorithms for Optimized DNA Sequencing. - Allon G. Percus; David C. Torney (SODA, 1999)

Optimizing through Co-evolutionary Avalanches. - Stefan Boettcher; Allon G. Percus; Michelangelo Grigni (PPSN, 2000)

Algorithms for optimizing production DNA sequencing. - Éva Czabarka; Goran Konjevod; Madhav V. Marathe; Allon G. Percus; David C. Torney (SODA, 2000)

Nature's way of optimizing. - Stefan Boettcher; Allon G. Percus (Artif. Intell., 2000)

Extremal Optimization for Graph Partitioning - Stefan Boettcher; Allon G. Percus (CoRR, 2001)

Extremal Optimization: an Evolutionary Local-Search Algorithm - Stefan Boettcher; Allon G. Percus (CoRR, 2002)

Resolution scalability for arbitrary wavelet transforms in the JPEG-2000 standard. - Christopher M. Brislawn; Brendt Wohlberg; Allon G. Percus (VCIP, 2003)

Optimization with extremal dynamics. - Stefan Boettcher; Allon G. Percus (Complex., 2003)

Scaling and Universality in Continuous Length Combinatorial Optimization - David J. Aldous; Allon G. Percus (CoRR, 2003)

Spines of Random Constraint Satisfaction Problems: Definition and Impact on Computational Complexity. - Stefan Boettcher; Gabriel Istrate; Allon G. Percus (AI&M, 2004)

Reducing Large Internet Topologies for Faster Simulations. - Vaishnavi Krishnamurthy; Michalis Faloutsos; Marek Chrobak; Li Lao; Jun-Hong Cui; Allon G. Percus (NETWORKING, 2005)

Spines of random constraint satisfaction problems: definition and connection with computational complexity. - Gabriel Istrate; Stefan Boettcher; Allon G. Percus (Ann. Math. Artif. Intell., 2005)

Introduction: Where Statistical Physics Mects Computation. - Allon G. Percus; Gabriel Istrate; Cristopher Moore (Computational Complexity and Statistical Physics, 2006)

Giant Component and Connectivity in Geographical Threshold Graphs. - Milan Bradonjic; Aric A. Hagberg; Allon G. Percus (WAW, 2007)

Sampling large Internet topologies for simulation purposes. - Vaishnavi Krishnamurthy; Michalis Faloutsos; Marek Chrobak; Jun-Hong Cui; Li Lao; Allon G. Percus (Comput. Networks, 2007)

The Peculiar Phase Structure of Random Graph Bisection - Allon G. Percus; Gabriel Istrate; Bruno Gonçalves; Robert Z. Sumi; Stefan Boettcher (CoRR, 2008)

The Structure of Geographical Threshold Graphs. - Milan Bradonjic; Aric A. Hagberg; Allon G. Percus (Internet Math., 2008)

On a locally minimum cost forwarding game. - Stephan J. Eidenbenz; Gunes Ercal-Ozkaya; Adam Meyerson; Allon G. Percus (FOWANC@MobiHoc, 2009)

Incentive Compatible and Globally Efficient Position Based Routing for Selfish Reverse Multicast in Wireless Sensor Networks. - Stephan J. Eidenbenz; Gunes Ercal-Ozkaya; Adam Meyerson; Allon G. Percus; Sarvesh Kumar Varatharajan (Algorithms, 2009)

Component Evolution in General Random Intersection Graphs. - Milan Bradonjic; Aric A. Hagberg; Nicolas W. Hengartner; Allon G. Percus (WAW, 2010)

Coloring Geographical Threshold Graphs. - Milan Bradonjic; Tobias Müller; Allon G. Percus (Discret. Math. Theor. Comput. Sci., 2010)

Cooperative search with autonomous vehicles in a 3D aquatic testbed. - Matthew Keeter; Daniel Moore; Ryan Muller; Eric Nieters; Jennifer Flenner; Susan E. Martonosi; Andrea L. Bertozzi; Allon G. Percus; Rachel Levy (ACC, 2012)

Multiclass Semi-supervised Learning on Graphs Using Ginzburg-Landau Functional Minimization. - Cristina Garcia-Cardona; Arjuna Flenner; Allon G. Percus (ICPRAM (Selected Papers), 2013)

Multiclass Diffuse Interface Models for Semi-supervised Learning on Graphs. - Cristina Garcia-Cardona; Arjuna Flenner; Allon G. Percus (ICPRAM, 2013)

The phase transition in inhomogeneous random intersection graphs - Milan Bradonjic; Aric A. Hagberg; Nicolas W. Hengartner; Nathan Lemons; Allon G. Percus (CoRR, 2013)

Spectral Clustering with Epidemic Diffusion - Laura M. Smith; Kristina Lerman; Cristina Garcia-Cardona; Allon G. Percus; Rumi Ghosh (CoRR, 2013)

Improving image clustering using sparse text and the wisdom of the crowds. - Anna Ma; Arjuna Flenner; Deanna Needell; Allon G. Percus (ACSSC, 2014)

Diffuse interface methods for multiclass segmentation of high-dimensional data. - Ekaterina Merkurjev; Cristina Garcia-Cardona; Andrea L. Bertozzi; Arjuna Flenner; Allon G. Percus (Appl. Math. Lett., 2014)

Multiclass Data Segmentation Using Diffuse Interface Methods on Graphs. - Cristina Garcia-Cardona; Ekaterina Merkurjev; Andrea L. Bertozzi; Arjuna Flenner; Allon G. Percus (IEEE Trans. Pattern Anal. Mach. Intell., 2014)

Neighbor-Neighbor Correlations Explain Measurement Bias in Networks. - Xin-Zeng Wu; Allon G. Percus; Kristina Lerman (CoRR, 2016)

Partitioning Networks with Node Attributes by Compressing Information Flow. - Laura M. Smith; Linhong Zhu; Kristina Lerman; Allon G. Percus (ACM Trans. Knowl. Discov. Data, 2016)

Dimensionality reduction for acoustic vehicle classification with spectral clustering. - Justin Sunu; Allon G. Percus (CoRR, 2017)

Machine learning for graph-based representations of three-dimensional discrete fracture networks. - Manuel Valera; Zhengyang Guo; Priscilla Kelly; Sean Matz; Adrian Cantu; Allon G. Percus; Jeffrey D. Hyman; Gowri Srinivasan; Hari S. Viswanathan (CoRR, 2017)

Dimensionality reduction for acoustic vehicle classification with spectral embedding. - Justin Sunu; Allon G. Percus (ICNSC, 2018)

Unsupervised Vehicle Recognition Using Incremental Reseeding of Acoustic Signatures. - Justin Sunu; Allon G. Percus; Blake Hunter (ISMIS, 2018)

Degree Correlations Amplify the Growth of Cascades in Networks. - Xin-Zeng Wu; Peter G. Fennell; Allon G. Percus; Kristina Lerman (CoRR, 2018)

Learning to fail: Predicting fracture evolution in brittle materials using recurrent graph convolutional neural networks. - Max Schwarzer; Bryce Rogan; Yadong Ruan; Zhengming Song; Diana Lee; Allon G. Percus; Viet T. Chau; Bryan A. Moore; Esteban Rougier; Hari S. Viswanathan; Gowri Srinivasan (CoRR, 2018)

A Model of Densifying Collaboration Networks. - Keith A. Burghardt; Allon G. Percus; Kristina Lerman (CoRR, 2021)

Clique Densification in Networks. - Haochen Pi; Keith Burghardt; Allon G. Percus; Kristina Lerman (CoRR, 2023)

Dynamics of Affective Polarization: From Consensus to Partisan Divides. - Buddhika Nettasinghe; Allon G. Percus; Kristina Lerman (CoRR, 2024)

Bayesian learning of gas transport in three-dimensional fracture networks. - Yingqi Shi; Donald J. Berry; John Kath; Shams Lodhy; An Ly; Allon G. Percus; Jeffrey D. Hyman; Kelly Moran; Justin D. Strait; Matthew R. Sweeney; Hari S. Viswanathan; Philip Stauffer (Comput. Geosci., 2024)

In-Group Love, Out-Group Hate: A Framework to Measure Affective Polarization via Contentious Online Discussions. - Buddhika Nettasinghe; Ashwin Rao; Bohan Jiang; Allon G. Percus; Kristina Lerman (WWW, 2025)