Multi-Knockout Genetic Network Analysis: The Rad6 Example. - Alon Kaufman; Martin Kupiec; Eytan Ruppin (CSB, 2004)

Fair localization of function via multi-lesion analysis. - Alon Keinan; Alon Kaufman; Nadia Sachs; Claus C. Hilgetag; Eytan Ruppin (Neuroinformatics, 2004)

Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments. - Alon Kaufman; Alon Keinan; Isaac Meilijson; Martin Kupiec; Eytan Ruppin (PLoS Comput. Biol., 2005)

Inferring Functional Pathways from Multi-Perturbation Data. - Nir Yosef; Alon Kaufman; Eytan Ruppin (ISMB (Supplement of Bioinformatics), 2006)

Gene Expression of Caenorhabditis elegans Neurons Carries Information on Their Synaptic Connectivity. - Alon Kaufman; Gideon Dror; Isaac Meilijson; Eytan Ruppin (PLoS Comput. Biol., 2006)

Meta-analysis of gene expression data: a predictor-based approach. - Irit Fishel; Alon Kaufman; Eytan Ruppin (Bioinform., 2007)