DebiasedDTA: Model Debiasing to Boost Drug-Target Affinity Prediction. - Riza Özçelik; Alperen Bag; Berk Atil; Arzucan Özgür; Elif Özkirimli 001 (CoRR, 2021)

Exploring Latent Dimensions of Crowd-sourced Creativity. - Umut Kocasari; Alperen Bag; Efehan Atici; Pinar Yanardag (CoRR, 2021)

Discovering Multiple and Diverse Directions for Cognitive Image Properties. - Umut Kocasari; Alperen Bag; Oguz Kaan Yüksel; Pinar Yanardag (CoRR, 2022)

A Computational Software for Training Robust Drug-Target Affinity Prediction Models: pydebiaseddta. - Melih Barsbey; Riza Özçelik; Alperen Bag; Berk Atil; Arzucan Özgür; Elif Ozkirimli 001 (J. Comput. Biol., 2023)

A Framework for Improving the Generalizability of Drug-Target Affinity Prediction Models. - Riza Özçelik; Alperen Bag; Berk Atil; Melih Barsbey; Arzucan Özgür; Elif Ozkirimli 001 (J. Comput. Biol., 2023)