AREM: Aligning Short Reads from ChIP-Sequencing by Expectation Maximization. - Daniel Newkirk; Jacob Biesinger; Alvin Chon; Kyoko Yokomori; Xiaohui Xie (J. Comput. Biol., 2011)

Scalable and Extensible Robinson-Foulds for Comparative Phylogenetics. - Alvin Chon; Pawel Górecki 001; Oliver Eulenstein; Xiaoqiu Huang 001; Ali Jannesari (IPDPS Workshops, 2022)