RhoanaNet Pipeline: Dense Automatic Neural Annotation. - Seymour Knowles-Barley; Verena Kaynig; Thouis Ray Jones; Alyssa Wilson; Joshua Morgan; Dongil Lee; Daniel R. Berger; Narayanan Kasthuri; Jeff W. Lichtman; Hanspeter Pfister (CoRR, 2016)

Scalable Interactive Visualization for Connectomics. - Daniel Haehn; John Hoffer; Brian Matejek; Adi Suissa-Peleg; Ali K. Al-Awami; Lee Kamentsky; Felix Gonda; Eagon Meng; William Zhang; Richard Schalek; Alyssa Wilson; Toufiq Parag; et al. (Informatics, 2017)

SynapseCLR: Uncovering features of synapses in primary visual cortex through contrastive representation learning. - Alyssa Wilson; Mehrtash Babadi (Patterns, 2023)