Ontological Annotation with WordNet. - Antonio Sanfilippo; Stephen Tratz; Michel le Gregory; Alan R. Chappell; Paul Whitney; Christian Posse; Patrick Paulson; Bob Baddeley; Ryan Hohimer; Amanda M. White (SemAnnot@ISWC, 2005)

Automated Microarray Image Analysis Toolbox for MATLAB. - Amanda M. White; Don Simone Daly; Alan R. Willse; Miroslava Protic; Darrell P. Chandler (Bioinform., 2005)

Evaluating concentration estimation errors in ELISA microarray experiments. - Don Simone Daly; Amanda M. White; Susan M. Varnum; Kevin K. Anderson; Richard C. Zangar (BMC Bioinform., 2005)

ProMAT: protein microarray analysis tool. - Amanda M. White; Don Simone Daly; Susan M. Varnum; Kevin K. Anderson; Nikki Bollinger; Richard C. Zangar (Bioinform., 2006)

SEBINI-CABIN: An Analysis Pipeline for Biological Network Inference, with a Case Study in Protein-Protein Interaction Network Reconstruction. - Ronald C. Taylor; Mudita Singhal; Don Simone Daly; Kelly Domico; Amanda M. White; Deanna L. Auberry; Kenneth J. Auberry; Brian Hooker; Gregory B. Hurst; Jason E. McDermott; W. Hayes McDonald; Dale Pelletier; et al. (ICMLA, 2007)

A Bayesian estimator of protein-protein association probabilities. - Jason M. Gilmore; Deanna L. Auberry; Julia L. Sharp; Amanda M. White; Kevin K. Anderson; Don Simone Daly (Bioinform., 2008)

Measuring the Structural Preservation of Semantic Hierarchy Alignment. - Cliff A. Joslyn; Patrick R. Paulson; Amanda M. White (OM, 2009)

ELISA-BASE: an integrated bioinformatics tool for analyzing and tracking ELISA microarray data. - Amanda M. White; James R. Collett; Shannon L. Seurynck-Servoss; Don Simone Daly; Richard C. Zangar (Bioinform., 2009)

An analysis pipeline for the inference of protein-protein interaction networks. - Ronald C. Taylor; Mudita Singhal; Don Simone Daly; Jason M. Gilmore; William R. Cannon; Kelly Domico; Amanda M. White; Deanna L. Auberry; Kenneth J. Auberry; Brian Hooker; Gregory B. Hurst; Jason E. McDermott; et al. (Int. J. Data Min. Bioinform., 2009)

Parameterizing bayesian network representations of social-behavioral models by expert elicitation. - Stephen J. Walsh; Angela Dalton; Paul Whitney; Amanda M. White (ISI, 2010)

Technosocial Predictive Analytics for Illicit Nuclear Trafficking. - Antonio Sanfilippo; Scott Butner; Andrew J. Cowell; Angela Dalton; Jereme Haack; Sean Kreyling; Rick Riensche; Amanda M. White; Paul Whitney (SBP, 2011)

Bayesian Networks for Social Modeling. - Paul Whitney; Amanda M. White; Stephen J. Walsh; Angela Dalton; Alan Brothers (SBP, 2011)

Heterogeneous Data Fusion via Space Alignment Using Nonmetric Multidimensional Scaling. - Jaegul Choo; Shawn Bohn; Grant Nakamura; Amanda M. White; Haesun Park (SDM, 2012)

The lifecycle of Bayesian network models developed for Multi-Source Signature assessment of Nuclear Programs. - Zoe N. Gastelum; Amanda M. White; Paul D. Whitney; Luke J. Gosink; Landon H. Sego (ISI, 2013)

ftmsRanalysis: An R package for exploratory data analysis and interactive visualization of FT-MS data. - Lisa M. Bramer; Amanda M. White; Kelly G. Stratton; Allison M. Thompson; Daniel Claborne; Kirsten Hofmockel; Lee Ann McCue (PLoS Comput. Biol., 2020)