Bioassay Ontology to Describe High-Throughput Screening Assays and their Results. - Uma Vempati; Ubbo Visser; Saminda Abeyruwan; Kunie Sakurai; Magdalena Przydzial; Caty Chung; Robin P. Smith; Amar Koleti; Christopher Mader; Vance P. Lemmon; Stephan C. Schürer (ICBO, 2011)

GPCR ontology: development and application of a G protein-coupled receptor pharmacology knowledge framework. - Magdalena Przydzial; Barun Bhhatarai; Amar Koleti; Uma Vempati; Stephan C. Schürer (Bioinform., 2013)

Evolving BioAssay Ontology (BAO): modularization, integration and applications. - Saminda Abeyruwan; Uma D. Vempati; Hande Küçük-McGinty; Ubbo Visser; Amar Koleti; Ahsan Mir; Kunie Sakurai; Caty Chung; Joshua A. Bittker; Paul A. Clemons; Steve Brudz; Anosha Siripala; et al. (J. Biomed. Semant., 2014)

Building Concordant Ontologies for Drug Discovery. - Hande Küçük-McGinty; Saurabh Mehta; Yu Lin; Nooshin Nabizadeh; Vasileios Stathias; Dusica Vidovic; Amar Koleti; Christopher Mader; Jianbin Duan; Ubbo Visser; Stephan C. Schürer (ICBO/BioCreative, 2016)

Drug target ontology to classify and integrate drug discovery data. - Yu Lin; Saurabh Mehta; Hande Küçük-McGinty; John Paul Turner; Dusica Vidovic; Michele Forlin; Amar Koleti; Dac-Trung Nguyen; Lars Juhl Jensen; Rajarshi Guha; Stephen L. Mathias; Oleg Ursu; et al. (J. Biomed. Semant., 2017)

Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data. - Amar Koleti; Raymond Terryn; Vasileios Stathias; Caty Chung; Daniel J. Cooper; John Paul Turner; Dusica Vidovic; Michele Forlin; Tanya T. Kelley; Alessandro D'Urso; Bryce K. Allen; Denis Torre; et al. (Nucleic Acids Res., 2018)

LINCS Data Portal 2.0: next generation access point for perturbation-response signatures. - Vasileios Stathias; John Paul Turner; Amar Koleti; Dusica Vidovic; Daniel J. Cooper; Mehdi Fazel-Najafabadi; Marcin Pilarczyk; Raymond Terryn; Caty Chung; Afoma Umeano; Daniel J. B. Clarke; Alexander Lachmann; et al. (Nucleic Acids Res., 2020)

TCRD and Pharos 2021: mining the human proteome for disease biology. - Timothy Sheils; Stephen L. Mathias; Keith J. Kelleher; Vishal B. Siramshetty; Dac-Trung Nguyen; Cristian Bologa; Lars Juhl Jensen; Dusica Vidovic; Amar Koleti; Stephan C. Schürer; Anna Waller; Jeremy J. Yang; et al. (Nucleic Acids Res., 2021)