Improved Methods for Template-Matching in Electron-Density Maps Using Spherical Harmonics. - Frank DiMaio; Ameet Soni; George N. Phillips; Jude W. Shavlik (BIBM, 2007)

Creating protein models from electron-density maps using particle-filtering methods. - Frank DiMaio; Dmitry A. Kondrashov; Eduard Bitto; Ameet Soni; Craig A. Bingman; George N. Phillips Jr.; Jude W. Shavlik (Bioinform., 2007)

Spherical-harmonic decomposition for molecular recognition in electron-density maps. - Frank DiMaio; Ameet Soni; George N. Phillips; Jude W. Shavlik (Int. J. Data Min. Bioinform., 2009)

Guiding belief propagation using domain knowledge for protein-structure determination. - Ameet Soni; Craig A. Bingman; Jude W. Shavlik (BCB, 2010)

Probabilistic Ensembles for Improved Inference in protein-Structure Determination. - Ameet Soni; Jude W. Shavlik (J. Bioinform. Comput. Biol., 2012)

A graphical model approach to ATLAS-free mining of MRI images. - Chris S. Magnano; Ameet Soni; Sriraam Natarajan; Gautam Kunapuli (SDM, 2014)

A support program for introductory CS courses that improves student performance and retains students from underrepresented groups. - Tia Newhall; Lisa Meeden; Andrew Danner; Ameet Soni; Frances Ruiz; Richard Wicentowski (SIGCSE, 2014)

A comprehensive analysis of classification algorithms for cancer prediction from gene expression. - Raehoon Jeong; Ameet Soni (BCB, 2015)

TAC KBP 2015 : English Slot Filling Track Relational Learning with Expert Advice. - Dileep Viswanathan; Anurag Wazalwar; Sriraam Natarajan; Ameet Soni; Jude W. Shavlik (TAC, 2015)

A Comparison of Weak Supervision methods for Knowledge Base Construction. - Ameet Soni; Dileep Viswanathan; Niranjan Pachaiyappan; Sriraam Natarajan (AKBC@NAACL-HLT, 2016)

Deep Distant Supervision: Learning Statistical Relational Models for Weak Supervision in Natural Language Extraction. - Sriraam Natarajan; Ameet Soni; Anurag Wazalwar; Dileep Viswanathan; Kristian Kersting (Solving Large Scale Learning Tasks, 2016)

Learning Relational Dependency Networks for Relation Extraction. - Ameet Soni; Dileep Viswanathan; Jude W. Shavlik; Sriraam Natarajan (ILP, 2016)

Identifying Parkinson's Patients: A Functional Gradient Boosting Approach. - Devendra Singh Dhami; Ameet Soni; David Page; Sriraam Natarajan (AIME, 2017)

Deep Residual Nets for Improved Alzheimer's Diagnosis. - Aly Valliani; Ameet Soni (BCB, 2017)

Model AI Assignments 2020. - Todd W. Neller; Stephen Keeley; Michael Guerzhoy; Wolfgang Hönig; Jiaoyang Li 001; Sven Koenig; Ameet Soni; Krista Thomason; Lisa Zhang; Bibin Sebastian; Cinjon Resnick; Avital Oliver; et al. (AAAI, 2020)