Determination of Major Lineages of Mycobacterium tuberculosis Complex Using Mycobacterial Interspersed Repetitive Units. - Minoo Aminian; Amina Shabbeer; Kristin P. Bennett (BIBM, 2009)

Examining the sublineage structure of Mycobacterium tuberculosis complex strains with multiple-biomarker tensors. - Cagri Ozcaglar; Amina Shabbeer; Scott L. Vandenberg; Bülent Yener; Kristin P. Bennett (BIBM, 2010)

Online Knowledge-Based Support Vector Machines. - Gautam Kunapuli; Kristin P. Bennett; Amina Shabbeer; Richard Maclin; Jude W. Shavlik (ECML/PKDD (2), 2010)

A conformal Bayesian network for classification of Mycobacterium tuberculosis complex lineages. - Minoo Aminian; Amina Shabbeer; Kristin P. Bennett (BMC Bioinform., 2010)

Knowledge-based Bayesian network for the classification of Mycobacterium tuberculosis complex sublineages. - Minoo Aminian; Amina Shabbeer; Kane Hadley; Cagri Ozcaglar; Scott L. Vandenberg; Kristin P. Bennett (BCB, 2011)

Visualization of tuberculosis patient and Mycobacterium tuberculosis complex genotype data via host-pathogen maps. - Kristin P. Bennett; Cagri Ozcaglar; Janani Ranganathan; Srivatsan Raghavan; Jacob Katz; Dan Croft; Bülent Yener; Amina Shabbeer (BIBM Workshops, 2011)

Data-Driven Insights into Deletions of Mycobacterium tuberculosis Complex Chromosomal DR Region Using Spoligoforests. - Cagri Ozcaglar; Amina Shabbeer; Natalia Kurepina; Bülent Yener; Kristin P. Bennett (BIBM, 2011)

Preserving proximity relations and minimizing edge-crossings in high dimensional graph visualizations. - Amina Shabbeer; Cagri Ozcaglar; Bülent Yener; Kristin P. Bennett (LDAV, 2011)

Nonconvex nonsmooth optimization for bioinformatics. - Amina Shabbeer (2013)

Entity and Event Topic Extraction from Podcast Episode Title and Description Using Entity Linking. - Christian Siagian; Amina Shabbeer (WWW (Companion Volume), 2023)