Systrip: A Visual Environment for the Investigation of Time-series Data in the Context of Metabolic Networks. - Jonathan Dubois; Ludovic Cottret; Amine Ghozlane; David Auber; Frédéric Bringaud; Patricia Thébault; Fabien Jourdan; Romain Bourqui (IV, 2012)

Flux Analysis of the Trypanosoma brucei Glycolysis Based on a Multiobjective-Criteria Bioinformatic Approach. - Amine Ghozlane; Frédéric Bringaud; Hayssam Soueidan; Isabelle Dutour; Fabien Jourdan; Patricia Thébault (Adv. Bioinformatics, 2012)

Développement de méthodes bioinformatiques dédiées à la prédiction et l'analyse des réseaux métaboliques et des ARN non codants. (Development of bioinformatic methods dedicated to the prediction and the analysis of metabolic networks and non-coding RNA). - Amine Ghozlane (2012)

Genome-wide detection of sRNA targets with rNAV. - Jonathan Dubois; Amine Ghozlane; Patricia Thébault; Isabelle Dutour; Romain Bourqui (BioVis, 2013)

SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis. - Stevenn Volant; Pierre Lechat; Perrine Woringer; Laurence Motreff; Pascal Campagne; Christophe Malabat; Sean Kennedy; Amine Ghozlane (BMC Bioinform., 2020)