A new DP algorithm for comparing gene expression data using geometric similarity. - Amir Vajdi; Nurit Haspel; Hadi Banaee (BIBM, 2015)

Detecting chromosomal structural variation using jaccard distance and parallel architecture. - Hamidreza Mohebbi; Amir Vajdi; Nurit Haspel; Dan A. Simovici (BIBM, 2017)

Integrating Co-Evolutionary Information in Monte Carlo Based Method for Proteins Trajectory Simulation. - Amir Vajdi; Arpita Joshi; Nurit Haspel (BCB, 2019)

Patch-DCA: improved protein interface prediction by utilizing structural information and clustering DCA scores. - Amir Vajdi; Kourosh Zarringhalam; Nurit Haspel (Bioinform., 2020)

Sequential Multi-task Learning for Histopathology-Based Prediction of Genetic Mutations with Extremely Imbalanced Labels. - Haleh Akrami; Tosha Shah; Amir Vajdi; Andrew Brown; Radha Krishnan; Razvan Cristescu; Antong Chen (MOVI@MICCAI, 2022)

Prediction of tumor mutation burden from H&E whole-slide images: a comparison of training strategies with convolutional neural networks. - Antong Chen; Tosha Shah; Andrew Brown; Haleh Akrami; Albert Swiston; Amir Vajdi; Radha Krishnan; Razvan Cristescu (Digital and Computational Pathology, 2022)