Adaptive step size selection for optimization via the ski rental problem. - Amirali Aghazadeh; Ali Ayremlou; Daniel D. Calderon; Tom Goldstein; Raajen Patel; Divyanshu Vats; Richard G. Baraniuk (ICASSP, 2013)

Near-Isometric Binary Hashing for Large-scale Datasets. - Amirali Aghazadeh; Andrew S. Lan; Anshumali Shrivastava; Richard G. Baraniuk (CoRR, 2016)

RHash: Robust Hashing via L_infinity-norm Distortion. - Amirali Aghazadeh; Andrew S. Lan; Anshumali Shrivastava; Richard G. Baraniuk (IJCAI, 2017)

MISSION: Ultra Large-Scale Feature Selection using Count-Sketches. - Amirali Aghazadeh; Ryan Spring; Daniel LeJeune; Gautam Dasarathy; Anshumali Shrivastava; Richard G. Baraniuk (ICML, 2018)

Insense: Incoherent sensor selection for sparse signals. - Amirali Aghazadeh; Mohammad Golbabaee; Andrew S. Lan; Richard G. Baraniuk (Signal Process., 2018)

CRISPRL and: Interpretable large-scale inference of DNA repair landscape based on a spectral approach. - Amirali Aghazadeh; Orhan Ocal; Kannan Ramchandran (Bioinform., 2020)

BEAR: Sketching BFGS Algorithm for Ultra-High Dimensional Feature Selection in Sublinear Memory. - Amirali Aghazadeh; Vipul Gupta; Alex DeWeese; Onur Ozan Koyluoglu; Kannan Ramchandran (MSML, 2021)

Group-Structured Adversarial Training. - Farzan Farnia; Amirali Aghazadeh; James Zou 001; David Tse (CoRR, 2021)

Efficiently Computing Sparse Fourier Transforms of q-ary Functions. - Yigit Efe Erginbas; Justin Singh Kang; Amirali Aghazadeh; Kannan Ramchandran (ISIT, 2023)

ProtiGeno: a prokaryotic short gene finder using protein language models. - Tony Tu; Gautham Krishna; Amirali Aghazadeh (CoRR, 2023)

Spectral Regularization Allows Data-frugal Learning over Combinatorial Spaces. - Amirali Aghazadeh; Nived Rajaraman; Tony Tu; Kannan Ramchandran (Trans. Mach. Learn. Res., 2023)

On Recovering Higher-order Interactions from Protein Language Models. - Darin Tsui; Amirali Aghazadeh (CoRR, 2024)

SHAP zero Explains All-order Feature Interactions in Black-box Genomic Models with Near-zero Query Cost. - Darin Tsui; Aryan Musharaf; Amirali Aghazadeh (CoRR, 2024)

Efficient Algorithm for Sparse Fourier Transform of Generalized q-ary Functions. - Darin Tsui; Kunal Talreja; Amirali Aghazadeh (CoRR, 2025)

AstroAgents: A Multi-Agent AI for Hypothesis Generation from Mass Spectrometry Data. - Daniel Saeedi; Denise Buckner; Jose C. Aponte; Amirali Aghazadeh (CoRR, 2025)