Activation through a Narrow Opening. - Amit Singer; Zeev Schuss (SIAM J. Appl. Math., 2007)

Partially Reflected Diffusion. - Amit Singer; Zeev Schuss; Andrei Osipov; David Holcman (SIAM J. Appl. Math., 2008)

Graph Laplacian Tomography From Unknown Random Projections. - Ronald R. Coifman; Yoel Shkolnisky; Fred J. Sigworth; Amit Singer (IEEE Trans. Image Process., 2008)

A Poisson–Nernst–Planck Model for Biological Ion Channels—An Asymptotic Analysis in a Three-Dimensional Narrow Funnel. - Amit Singer; John Norbury (SIAM J. Appl. Math., 2009)

Diffusion Interpretation of Nonlocal Neighborhood Filters for Signal Denoising. - Amit Singer; Yoel Shkolnisky; Boaz Nadler (SIAM J. Imaging Sci., 2009)

Uniqueness of Low-Rank Matrix Completion by Rigidity Theory. - Amit Singer; Mihai Cucuringu (SIAM J. Matrix Anal. Appl., 2010)

Fast wavelet-based single-particle reconstruction in Cryo-EM. - Cédric Vonesch; Lanhui Wang; Yoel Shkolnisky; Amit Singer (ISBI, 2011)

Eigenvector Synchronization, Graph Rigidity and the Molecule Problem - Mihai Cucuringu; Amit Singer; David Cowburn (CoRR, 2011)

Dense Fast Random Projections and Lean Walsh Transforms. - Edo Liberty; Nir Ailon; Amit Singer (Discret. Comput. Geom., 2011)

Representation Theoretic Patterns in Three-Dimensional Cryo-Electron Microscopy II - The Class Averaging Problem. - Ronny Hadani; Amit Singer (Found. Comput. Math., 2011)

Three-Dimensional Structure Determination from Common Lines in Cryo-EM by Eigenvectors and Semidefinite Programming. - Amit Singer; Yoel Shkolnisky (SIAM J. Imaging Sci., 2011)

Viewing Angle Classification of Cryo-Electron Microscopy Images Using Eigenvectors. - Amit Singer; Zhizhen Zhao 001; Yoel Shkolnisky; Ronny Hadani (SIAM J. Imaging Sci., 2011)

Computing Steerable Principal Components of a Large Set of Images and Their Rotations. - Colin Ponce; Amit Singer (IEEE Trans. Image Process., 2011)

Global Motion Estimation from Point Matches. - Mica Arie-Nachimson; Shahar Z. Kovalsky; Ira Kemelmacher-Shlizerman; Amit Singer; Ronen Basri (3DIMPVT, 2012)

Cramér-Rao bounds for synchronization of rotations - Nicolas Boumal; Amit Singer; Pierre-Antoine Absil; Vincent D. Blondel (CoRR, 2012)

Fourier-Bessel rotational invariant eigenimages - Zhizhen Zhao 001; Amit Singer (CoRR, 2012)

Exact and Stable Recovery of Rotations for Robust Synchronization - Lanhui Wang; Amit Singer (CoRR, 2012)

Orientation Determination from Cryo-EM images Using Least Unsquared Deviation - Lanhui Wang; Amit Singer; Zaiwen Wen (CoRR, 2012)

Viewing Direction Estimation in Cryo-EM Using Synchronization. - Yoel Shkolnisky; Amit Singer (SIAM J. Imaging Sci., 2012)

Non-Local Euclidean Medians. - Kunal N. Chaudhury; Amit Singer (IEEE Signal Process. Lett., 2012)

Sensor network localization by eigenvector synchronization over the euclidean group. - Mihai Cucuringu; Yaron Lipman; Amit Singer (ACM Trans. Sens. Networks, 2012)

Robust estimation of rotations from relative measurements by maximum likelihood. - Nicolas Boumal; Amit Singer; Pierre-Antoine Absil (CDC, 2013)

Non-local patch regression: Robust image denoising in patch space. - Kunal N. Chaudhury; Amit Singer (ICASSP, 2013)

Noisy dynamic simulations in the presence of symmetry: Data alignment and model reduction. - Benjamin Sonday; Amit Singer; Ioannis G. Kevrekidis (Comput. Math. Appl., 2013)

Approximating the Little Grothendieck Problem over the Orthogonal Group. - Afonso S. Bandeira; Christopher Kennedy; Amit Singer (CoRR, 2013)

Global registration of multiple point clouds using semidefinite programming. - Kunal N. Chaudhury; Yuehaw Khoo; Amit Singer; David Cowburn (CoRR, 2013)

Camera Motion Estimation by Convex Programming. - Onur Özyesil; Amit Singer; Ronen Basri (CoRR, 2013)

Rotationally Invariant Image Representation for Viewing Direction Classification in Cryo-EM. - Zhizhen Zhao 001; Amit Singer (CoRR, 2013)

Two-Dimensional Tomography from Noisy Projections Taken at Unknown Random Directions. - Amit Singer; Hau-Tieng Wu (SIAM J. Imaging Sci., 2013)

Orientation Determination of Cryo-EM Images Using Least Unsquared Deviations. - Lanhui Wang; Amit Singer; Zaiwen Wen (SIAM J. Imaging Sci., 2013)

A Cheeger Inequality for the Graph Connection Laplacian. - Afonso S. Bandeira; Amit Singer; Daniel A. Spielman (SIAM J. Matrix Anal. Appl., 2013)

Open Problem: Tightness of maximum likelihood semidefinite relaxations. - Afonso S. Bandeira; Yuehaw Khoo; Amit Singer (COLT, 2014)

Multireference alignment using semidefinite programming. - Afonso S. Bandeira; Moses Charikar; Amit Singer; Andy Zhu (ITCS, 2014)

Linear inverse problems on Erdős-Rényi graphs: Information-theoretic limits and efficient recovery. - Emmanuel Abbe; Afonso S. Bandeira; Annina Bracher; Amit Singer (ISIT, 2014)

Decoding Binary Node Labels from Censored Edge Measurements: Phase Transition and Efficient Recovery. - Emmanuel Abbe; Afonso S. Bandeira; Annina Bracher; Amit Singer (IEEE Trans. Netw. Sci. Eng., 2014)

Robust camera location estimation by convex programming. - Onur Özyesil; Amit Singer (CVPR, 2015)

Large-scale sensor network localization via rigid subnetwork registration. - Kunal N. Chaudhury; Yuehaw Khoo; Amit Singer (ICASSP, 2015)

Covariance estimation using conjugate gradient for 3D classification in CRYO-EM. - Joakim Andén; Eugene Katsevich; Amit Singer (ISBI, 2015)

Orthogonal matrix retrieval in cryo-electron microscopy. - Tejal Bhamre; Teng Zhang 002; Amit Singer (ISBI, 2015)

Non-unique games over compact groups and orientation estimation in cryo-EM. - Afonso S. Bandeira; Yutong Chen; Amit Singer (CoRR, 2015)

Covariance Matrix Estimation for the Cryo-EM Heterogeneity Problem. - Gene Katsevich; Alexander Katsevich; Amit Singer (SIAM J. Imaging Sci., 2015)

Stable Camera Motion Estimation Using Convex Programming. - Onur Özyesil; Amit Singer; Ronen Basri (SIAM J. Imaging Sci., 2015)

Global Registration of Multiple Point Clouds Using Semidefinite Programming. - Kunal N. Chaudhury; Yuehaw Khoo; Amit Singer (SIAM J. Optim., 2015)

Denoising and Covariance Estimation of Single Particle Cryo-EM Images. - Tejal Bhamre; Teng Zhang 002; Amit Singer (CoRR, 2016)

Residual Dipolar Coupling, Protein Backbone Conformation and Semidefinite Programming. - Yuehaw Khoo; Amit Singer; David Cowburn (CoRR, 2016)

Bias Correction in Saupe Tensor Estimation. - Yuehaw Khoo; Amit Singer; David Cowburn (CoRR, 2016)

A Representation Theory Perspective on Simultaneous Alignment and Classification. - Roy R. Lederman; Amit Singer (CoRR, 2016)

Marčenko-Pastur law for Tyler's M-estimator. - Teng Zhang 002; Xiuyuan Cheng; Amit Singer (J. Multivar. Anal., 2016)

Approximating the little Grothendieck problem over the orthogonal and unitary groups. - Afonso S. Bandeira; Christopher Kennedy; Amit Singer (Math. Program., 2016)

Fast Steerable Principal Component Analysis. - Zhizhen Zhao 001; Yoel Shkolnisky; Amit Singer (IEEE Trans. Computational Imaging, 2016)

A New Rank Constraint on Multi-view Fundamental Matrices, and Its Application to Camera Location Recovery. - Soumyadip Sengupta; Tal Amir; Meirav Galun; Tom Goldstein; David W. Jacobs; Amit Singer; Ronen Basri (CVPR, 2017)

Mahalanobis distance for class averaging of cryo-EM images. - Tejal Bhamre; Zhizhen Zhao 001; Amit Singer (ISBI, 2017)

Sample complexity of the boolean multireference alignment problem. - Emmanuel Abbe; João M. Pereira 002; Amit Singer (ISIT, 2017)

A survey of structure from motion. - Onur Özyesil; Vladislav Voroninski; Ronen Basri; Amit Singer (Acta Numer., 2017)

Anisotropic twicing for single particle reconstruction using autocorrelation analysis. - Tejal Bhamre; Teng Zhang 002; Amit Singer (CoRR, 2017)

Continuously heterogeneous hyper-objects in cryo-EM and 3-D movies of many temporal dimensions. - Roy R. Lederman; Amit Singer (CoRR, 2017)

The sample complexity of multi-reference alignment. - Amelia Perry; Jonathan Weed; Afonso S. Bandeira; Philippe Rigollet; Amit Singer (CoRR, 2017)

Multireference Alignment is Easier with an Aperiodic Translation Distribution. - Emmanuel Abbe; Tamir Bendory; William E. Leeb; João Pereira 001; Nir Sharon; Amit Singer (CoRR, 2017)

Tightness of the maximum likelihood semidefinite relaxation for angular synchronization. - Afonso S. Bandeira; Nicolas Boumal; Amit Singer (Math. Program., 2017)

Synthesizing developmental trajectories. - Paul Villoutreix; Joakim Andén; Bomyi Lim; Hang Lu; Ioannis G. Kevrekidis; Amit Singer; Stanislav Y. Shvartsman (PLoS Comput. Biol., 2017)

Heterogeneous multireference alignment: A single pass approach. - Nicolas Boumal; Tamir Bendory; Roy R. Lederman; Amit Singer (CISS, 2018)

3D ab initio modeling in cryo-EM by autocorrelation analysis. - Eitan Levin; Tamir Bendory; Nicolas Boumal; Joe Kileel 001; Amit Singer (ISBI, 2018)

Estimation in the Group Action Channel. - Emmanuel Abbe; João M. Pereira 002; Amit Singer (ISIT, 2018)

Semidefinite programming approach for the quadratic assignment problem with a sparse graph. - José F. S. Bravo Ferreira; Yuehaw Khoo; Amit Singer (Comput. Optim. Appl., 2018)

APPLE Picker: Automatic Particle Picking, a Low-Effort Cryo-EM Framework. - Ayelet Heimowitz; Joakim Andén; Amit Singer (CoRR, 2018)

Steerable ePCA. - Zhizhen Zhao 001; Lydia T. Liu; Amit Singer (CoRR, 2018)

Synchronization over Cartan Motion Groups via Contraction. - Onur Özyesil; Nir Sharon; Amit Singer (SIAM J. Appl. Algebra Geom., 2018)

Structural Variability from Noisy Tomographic Projections. - Joakim Andén; Amit Singer (SIAM J. Imaging Sci., 2018)

Bispectrum Inversion With Application to Multireference Alignment. - Tamir Bendory; Nicolas Boumal; Chao Ma 012; Zhizhen Zhao 001; Amit Singer (IEEE Trans. Signal Process., 2018)

Multi-target detection with application to cryo-electron microscopy. - Tamir Bendory; Nicolas Boumal; William E. Leeb; Eitan Levin; Amit Singer (CoRR, 2019)

Hyper-Molecules: on the Representation and Recovery of Dynamical Structures, with Application to Flexible Macro-Molecular Structures in Cryo-EM. - Roy R. Lederman; Joakim Andén; Amit Singer (CoRR, 2019)

Cryo-EM reconstruction of continuous heterogeneity by Laplacian spectral volumes. - Amit Moscovich; Amit Halevi; Joakim Andén; Amit Singer (CoRR, 2019)

Method of moments for 3-D single particle ab initio modeling with non-uniform distribution of viewing angles. - Nir Sharon; Joe Kileel 001; Yuehaw Khoo; Boris Landa; Amit Singer (CoRR, 2019)

Bias and variance reduction and denoising for CTF Estimation. - Ayelet Heimowitz; Joakim Andén; Amit Singer (CoRR, 2019)

The Sample Complexity of Multireference Alignment. - Amelia Perry; Jonathan Weed; Afonso S. Bandeira; Philippe Rigollet; Amit Singer (SIAM J. Math. Data Sci., 2019)

Multireference Alignment Is Easier With an Aperiodic Translation Distribution. - Emmanuel Abbe; Tamir Bendory; William E. Leeb; João M. Pereira 002; Nir Sharon; Amit Singer (IEEE Trans. Inf. Theory, 2019)

Image Recovery from Rotational And Translational Invariants. - Nicholas F. Marshall; Ti-Yen Lan; Tamir Bendory; Amit Singer (ICASSP, 2020)

Earthmover-Based Manifold Learning for Analyzing Molecular Conformation Spaces. - Nathan Zelesko; Amit Moscovich; Joe Kileel 001; Amit Singer (ISBI, 2020)

Super-resolution multi-reference alignment. - Tamir Bendory; Ariel Jaffe; William E. Leeb; Nir Sharon; Amit Singer (CoRR, 2020)

Wasserstein K-Means for Clustering Tomographic Projections. - Rohan Rao; Amit Moscovich; Amit Singer (CoRR, 2020)

Manifold learning with arbitrary norms. - Joe Kileel 001; Amit Moscovich; Nathan Zelesko; Amit Singer (CoRR, 2020)

Single-Particle Cryo-Electron Microscopy: Mathematical Theory, Computational Challenges, and Opportunities. - Tamir Bendory; Alberto Bartesaghi; Amit Singer (IEEE Signal Process. Mag., 2020)

Heterogeneous Multireference Alignment for Images With Application to 2D Classification in Single Particle Reconstruction. - Chao Ma 012; Tamir Bendory; Nicolas Boumal; Fred J. Sigworth; Amit Singer (IEEE Trans. Image Process., 2020)

Steerable ePCA: Rotationally Invariant Exponential Family PCA. - Zhizhen Zhao 001; Lydia T. Liu; Amit Singer (IEEE Trans. Image Process., 2020)

Multi-Target Detection With an Arbitrary Spacing Distribution. - Ti-Yen Lan; Tamir Bendory; Nicolas Boumal; Amit Singer (IEEE Trans. Signal Process., 2020)

Product Manifold Learning. - Sharon Zhang; Amit Moscovich; Amit Singer (AISTATS, 2021)

Random Conical Tilt Reconstruction without Particle Picking in Cryo-electron Microscopy. - Ti-Yen Lan; Nicolas Boumal; Amit Singer (CoRR, 2021)

Multi-target detection with rotations. - Tamir Bendory; Ti-Yen Lan; Nicholas F. Marshall; Iris Rukshin; Amit Singer (CoRR, 2021)

Sparse multi-reference alignment: sample complexity and computational hardness. - Tamir Bendory; Oscar Mickelin; Amit Singer (CoRR, 2021)

Centering Noisy Images with Application to Cryo-EM. - Ayelet Heimowitz; Nir Sharon; Amit Singer (SIAM J. Imaging Sci., 2021)

Representing Steerable Bases for cryo-EM in ASPIRE. - Christopher Langfield; Joshua Carmichael; Garrett Wright; Joakim Andén; Amit Singer (e-Science, 2022)

Sparse Multi-Reference Alignment: Sample Complexity and Computational Hardness. - Tamir Bendory; Oscar Michelin; Amit Singer (ICASSP, 2022)

A molecular prior distribution for Bayesian inference based on Wilson statistics. - Marc Aurèle Gilles; Amit Singer (Comput. Methods Programs Biomed., 2022)

Ab-initio contrast estimation and denoising of cryo-EM images. - Yunpeng Shi; Amit Singer (Comput. Methods Programs Biomed., 2022)

On a linearization of quadratic Wasserstein distance. - Philip Greengard; Jeremy G. Hoskins; Nicholas F. Marshall; Amit Singer (CoRR, 2022)

Autocorrelation analysis for cryo-EM with sparsity constraints: Improved sample complexity and projection-based algorithms. - Tamir Bendory; Yuehaw Khoo; Joe Kileel 001; Oscar Mickelin; Amit Singer (CoRR, 2022)

Fast Principal Component Analysis for Cryo-EM Images. - Nicholas F. Marshall; Oscar Mickelin; Yunpeng Shi; Amit Singer (CoRR, 2022)

NMR assignment through linear programming. - José F. S. Bravo Ferreira; David Cowburn; Yuehaw Khoo; Amit Singer (J. Glob. Optim., 2022)

An Approximate Expectation-Maximization for Two-Dimensional Multi-Target Detection. - Shay Kreymer; Amit Singer; Tamir Bendory (IEEE Signal Process. Lett., 2022)

Toward Single Particle Reconstruction without Particle Picking: Breaking the Detection Limit. - Tamir Bendory; Nicolas Boumal; William E. Leeb; Eitan Levin; Amit Singer (SIAM J. Imaging Sci., 2023)

Fast Expansion into Harmonics on the Disk: A Steerable Basis with Fast Radial Convolutions. - Nicholas F. Marshall; Oscar Mickelin; Amit Singer (SIAM J. Sci. Comput., 2023)

Subspace method of moments for ab initio 3-D single-particle Cryo-EM reconstruction. - Jeremy G. Hoskins; Yuehaw Khoo; Oscar Mickelin; Amit Singer; Yuguan Wang (CoRR, 2024)

Fast Expansion Into Harmonics on the Ball. - Joe Kileel 001; Nicholas F. Marshall; Oscar Mickelin; Amit Singer (SIAM J. Sci. Comput., 2025)

Fast alignment of heterogeneous images in sliced Wasserstein distance. - Yunpeng Shi; Amit Singer; Eric J. Verbeke (CoRR, 2025)

Manifold learning in metric spaces. - Liane Xu; Amit Singer (CoRR, 2025)

Diagonally-Weighted Generalized Method of Moments Estimation for Gaussian Mixture Modeling. - Liu Zhang; Oscar Mickelin; Sheng Xu; Amit Singer (CoRR, 2025)