Performance Modeling and Analysis of a Handover Channel Exchange Scheme in Mobile Cellular Communication Systems. - Manpreet Singh Dang; Amol Prakash; Rajeev Shorey; Natwar Modani; Dinesh K. Anvekar (ICC (2), 2000)

Motif Discovery in Heterogeneous Sequence Data. - Amol Prakash; Mathieu Blanchette; Saurabh Sinha; Martin Tompa (Pacific Symposium on Biocomputing, 2004)

Statistics of local multiple alignments. - Amol Prakash; Martin Tompa (ISMB (Supplement of Bioinformatics), 2005)

Assessing the Discordance of Multiple Sequence Alignments. - Amol Prakash; Martin Tompa (IEEE ACM Trans. Comput. Biol. Bioinform., 2009)