Dynamic System Identification For Guidance Of Stimulation Parameters In Haptic Simulation Environments. - Andac Demir; Safaa Eldeeb; Murat Akçakaya; Deniz Erdogmus (MLSP, 2019)

Removing TMS Artifacts from EEG Recordings Using a Deep Gated Recurrent Unit. - Andac Demir; Mathew Yarossi; Damon Hyde; Mouhsin Shafi; Dana H. Brooks; Deniz Erdogmus (NER, 2019)

AutoBayes: Automated Inference via Bayesian Graph Exploration for Nuisance-Robust Biosignal Analysis. - Andac Demir; Toshiaki Koike-Akino; Ye Wang 001; Deniz Erdogmus (CoRR, 2020)

EEG-GNN: Graph Neural Networks for Classification of Electroencephalogram (EEG) Signals. - Andac Demir; Toshiaki Koike-Akino; Ye Wang 001; Masaki Haruna; Deniz Erdogmus (EMBC, 2021)

AutoBayes: Automated Bayesian Graph Exploration for Nuisance- Robust Inference. - Andac Demir; Toshiaki Koike-Akino; Ye Wang 001; Deniz Erdogmus (IEEE Access, 2021)

EEG-based texture roughness classification in active tactile exploration with invariant representation learning networks. - Ozan Özdenizci; Safaa Eldeeb; Andac Demir; Deniz Erdogmus; Murat Akçakaya (Biomed. Signal Process. Control., 2021)

EEG-GAT: Graph Attention Networks for Classification of Electroencephalogram (EEG) Signals. - Andac Demir; Toshiaki Koike-Akino; Ye Wang 001; Deniz Erdogmus (EMBC, 2022)

ToDD: Topological Compound Fingerprinting in Computer-Aided Drug Discovery. - Andac Demir; Baris Coskunuzer; Yulia R. Gel; Ignacio Segovia-Dominguez; Yuzhou Chen; Bulent Kiziltan (NeurIPS, 2022)

EEG-NeXt: A Modernized ConvNet for The Classification of Cognitive Activity from EEG. - Andac Demir; Iya Khalil; Bulent Kiziltan (CoRR, 2022)

Topology-Aware Focal Loss for 3D Image Segmentation. - Andac Demir; Elie Massaad; Bulent Kiziltan (CVPR Workshops, 2023)

Multiparameter Persistent Homology for Molecular Property Prediction. - Andac Demir; Bulent Kiziltan (CoRR, 2023)

SE(3)-Invariant Multiparameter Persistent Homology for Chiral-Sensitive Molecular Property Prediction. - Andac Demir; Francis Prael III; Bulent Kiziltan (CoRR, 2023)

sc-OTGM: Single-Cell Perturbation Modeling by Solving Optimal Mass Transport on the Manifold of Gaussian Mixtures. - Andac Demir; Elizaveta Solovyeva; James Boylan; Mei Xiao; Fabrizio Serluca; Sebastian Hoersch; Jeremy Jenkins; Murthy V. Devarakonda; Bulent Kiziltan (CoRR, 2024)