Performing Ontology-Driven Gene Prediction Queries in a Multi-agent Environment. - Vassilis Koutkias; Andigoni Malousi; Nicos Maglaveras (ISBMDA, 2004)

Grid-Enabled Biosensor Networks for Pervasive Healthcare. - Ioanna Chouvarda; Vassilis Koutkias; Andigoni Malousi; Nicos Maglaveras (HealthGrid, 2005)

Vertical Integration of Bioinformatics Tools and Information Processing on Analysis Outcome. - Andigoni Malousi; Vassilis Koutkias; Ioanna Chouvarda; Nicos Maglaveras (ISBMDA, 2005)

Managing Evidence from Multiple Gene Finding Resources via an XML-based Integration Architecture. - Andigoni Malousi; Vassilis Koutkias; Nicos Maglaveras (J. Integr. Bioinform., 2005)

Constructing a Semantically Enriched Biomedical Service Space: A Paradigm with Bioinformatics Resources. - Vassilis Koutkias; Andigoni Malousi; Ioanna Chouvarda; Nicos Maglaveras (HealthGrid, 2006)

Intrinsic Splicing Profile of Human Genes Undergoing Simple Cassette Exon Events. - Andigoni Malousi; Vassilis Koutkias; Sofia Kouidou; Nicos Maglaveras (ISBMDA, 2006)

Engineering agent-mediated integration of bioinformatics analysis tools. - Vassilis Koutkias; Andigoni Malousi; Nicos Maglaveras (Multiagent Grid Syst., 2007)

Variable-length Positional Modeling for Biological Sequence Classification. - Andigoni Malousi; Ioanna Chouvarda; Vassilis Koutkias; Sofia Kouidou; Nicos Maglaveras (AMIA, 2008)

A generic Grid interface and execution framework for biomedical applications. - Konstantinos I. Vegoudakis; Vassilis Koutkias; Andigoni Malousi; Ioanna Chouvarda; Nicos Maglaveras (BIBE, 2008)

Ανάπτυξη ενοποιημένων τεχνικών διαχείρισης και επεξεργασίας βιολογικών δεδομένων με εφαρμογές στη μελέτη της γονιδιακής έκφρασης - Andigoni Malousi (2008)

SpliceIT: A hybrid method for splice signal identification based on probabilistic and biological inference. - Andigoni Malousi; Ioanna Chouvarda; Vassilis Koutkias; Sofia Kouidou; Nicos Maglaveras (J. Biomed. Informatics, 2010)

A personalized framework for medication treatment management in chronic care. - Vassilis Koutkias; Ioanna Chouvarda; Andreas Triantafyllidis; Andigoni Malousi; Georgios D. Giaglis; Nicos Maglaveras (IEEE Trans. Inf. Technol. Biomed., 2010)

GREMET: An integrative tool for the prediction of mutation effects on gene regulation. - Polykarpos Athanasiadis; Andigoni Malousi; Sofia Kouidou; Nicos Maglaveras (Comput. Methods Programs Biomed., 2013)

Linking Exome Sequencing Data with Drug Response Aberrations. - Konstantinos Kyriakidis; Alexandra Charalampidou; Pantelis Natsiavas; Ioannis S. Vizirianakis; Andigoni Malousi (MedInfo, 2019)

Reliable machine learning models in genomic medicine using conformal prediction. - Christina Papangelou; Konstantinos Kyriakidis; Pantelis Natsiavas; Ioanna Chouvarda; Andigoni Malousi (Frontiers Bioinform., 2025)