gACSON software for automated segmentation and morphology analyses of myelinated axons in 3D electron microscopy. - Andrea Behanova; Ali Abdollahzadeh; Ilya Belevich; Eija Jokitalo; Alejandra Sierra; Jussi Tohka (Comput. Methods Programs Biomed., 2022)

Cell Segmentation of in situ Transcriptomics Data Using Signed Graph Partitioning. - Axel Andersson; Andrea Behanova; Carolina Wählby; Filip Malmberg (GbRPR, 2023)

Convolutional Neural Networks for Automatic Detection of Intact Adenovirus from TEM Imaging with Debris, Broken and Artefacts Particles. - Olivier Rukundo; Andrea Behanova; Riccardo de Feo; Seppo Ronkko; Joni Oja; Jussi Tohka (CoRR, 2023)

Image and data analysis for understanding spatial transcriptomics and tissue architecture - Andrea Behanova (2024)