Genomic Functional Investigation through Statistical Analysis of Protein Families and Domains. - Andrea Maffezzoli; Andrea Franceschini; Elisa Bellistri; Francesco Pinciroli; Marco Masseroli (AMIA, 2006)

Statistical analysis of genomic protein family and domain controlled annotations for functional investigation of classified gene lists. - Marco Masseroli; Elisa Bellistri; Andrea Franceschini; Francesco Pinciroli (BMC Bioinform., 2007)

STITCH 2: an interaction network database for small molecules and proteins. - Michael Kuhn 004; Damian Szklarczyk; Andrea Franceschini; Monica Campillos; Christian von Mering; Lars Juhl Jensen; Andreas Beyer; Peer Bork (Nucleic Acids Res., 2010)

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. - Damian Szklarczyk; Andrea Franceschini; Michael Kuhn 004; Milan Simonovic; Alexander Roth 001; Pablo Minguez; Tobias Doerks; Manuel Stark; Jean Muller; Peer Bork; Lars Juhl Jensen; Christian von Mering (Nucleic Acids Res., 2011)

STITCH 3: zooming in on protein-chemical interactions. - Michael Kuhn 004; Damian Szklarczyk; Andrea Franceschini; Christian von Mering; Lars Juhl Jensen; Peer Bork (Nucleic Acids Res., 2012)

STRING v9.1: protein-protein interaction networks, with increased coverage and integration. - Andrea Franceschini; Damian Szklarczyk; Sune Frankild; Michael Kuhn 004; Milan Simonovic; Alexander Roth 001; Jianyi Lin; Pablo Minguez; Peer Bork; Christian von Mering; Lars Juhl Jensen (Nucleic Acids Res., 2013)

Learning Musical Contour on a Tabletop. - Andrea Franceschini; Robin C. Laney; Chris Dobbyn (ICMC, 2014)

STRING v10: protein-protein interaction networks, integrated over the tree of life. - Damian Szklarczyk; Andrea Franceschini; Stefan Wyder; Kristoffer Forslund; Davide Heller; Jaime Huerta-Cepas; Milan Simonovic; Alexander Roth 001; Alberto Santos; Kalliopi Tsafou; Michael Kuhn 004; Peer Bork; et al. (Nucleic Acids Res., 2015)

SVD-phy: improved prediction of protein functional associations through singular value decomposition of phylogenetic profiles. - Andrea Franceschini; Jianyi Lin; Christian von Mering; Lars Juhl Jensen (Bioinform., 2016)

A novel Lagrangian approach for the stable numerical simulation of fault and fracture mechanics. - Andrea Franceschini; Massimiliano Ferronato; Carlo Janna; Pietro Teatini (J. Comput. Phys., 2016)

Multilevel approaches for FSAI preconditioning. - Victor Antonio Paludetto Magri; Andrea Franceschini; Massimiliano Ferronato; Carlo Janna (Numer. Linear Algebra Appl., 2018)

A Robust Multilevel Approximate Inverse Preconditioner for Symmetric Positive Definite Matrices. - Andrea Franceschini; Victor Antonio Paludetto Magri; Massimiliano Ferronato; Carlo Janna (SIAM J. Matrix Anal. Appl., 2018)

Inequality: multi-modal equation entry on the web. - Andrea Franceschini; James P. Sharkey; Alastair R. Beresford (L@S, 2019)

A general preconditioning framework for coupled multiphysics problems with application to contact- and poro-mechanics. - Massimiliano Ferronato; Andrea Franceschini; Carlo Janna; Nicola Castelletto; Hamdi A. Tchelepi (J. Comput. Phys., 2019)

A Dynamic Pattern Factored Sparse Approximate Inverse Preconditioner on Graphics Processing Units. - Massimo Bernaschi; Mauro Carrozzo; Andrea Franceschini; Carlo Janna (SIAM J. Sci. Comput., 2019)

A Novel Algebraic Multigrid Approach Based on Adaptive Smoothing and Prolongation for Ill-Conditioned Systems. - Victor Antonio Paludetto Magri; Andrea Franceschini; Carlo Janna (SIAM J. Sci. Comput., 2019)

Algebraic stabilization of a Q1-P0 Lagrangian formulation for frictional contact mechanics with hydraulically active fractures. - Andrea Franceschini; Nicola Castelletto; Joshua A. White; Hamdi A. Tchelepi (CoRR, 2020)

An online platform for teaching upper secondary school computer science. - Jane Waite; Andrea Franceschini; Sue Sentance; Mathew Patterson; James P. Sharkey (UKICER, 2021)

A Reverse Augmented Constraint preconditioner for Lagrange multiplier methods in contact mechanics. - Andrea Franceschini; Matteo Frigo; Carlo Janna; Massimiliano Ferronato (CoRR, 2021)

On the construction of AMG prolongation through energy minimization. - Giovanni Isotton; Andrea Franceschini; Carlo Janna (PASC, 2022)

Scalable preconditioning for the stabilized contact mechanics problem. - Andrea Franceschini; Nicola Castelletto; Joshua A. White; Hamdi A. Tchelepi (J. Comput. Phys., 2022)

A scalable preconditioning framework for stabilized contact mechanics with hydraulically active fractures. - Andrea Franceschini; Laura Gazzola; Massimiliano Ferronato (J. Comput. Phys., 2022)

Play to Learn: from Serious Games to just Games. - Andrea Franceschini; Antonio Rodà (GoodIT, 2023)

Unexpected fault activation in underground gas storage. Part I: Mathematical model and mechanisms. - Andrea Franceschini; Claudia Zoccarato; Selena Baldan; Matteo Frigo; Massimiliano Ferronato; Carlo Janna; Giovanni Isotton; Pietro Teatini (CoRR, 2023)

Co-designed mini-games for children with visual impairment: a pilot study on their usability. - Tiziana Battistin; Nadir Dalla Pozza; Silvia Trentin; Giovanni Volpin; Andrea Franceschini; Antonio Rodà (Multim. Tools Appl., 2023)

Parallel Energy-Minimization Prolongation for Algebraic Multigrid. - Carlo Janna; Andrea Franceschini; Jacob B. Schroder; Luke N. Olson (SIAM J. Sci. Comput., 2023)

Virtual recreation of an interactive multimedia art installation from 1977. - Alessandro Russo 008; Andrea Franceschini; Antonio Rodà; Sergio Canazza (AVICH@AVI, 2024)

Gender Biases in Robots for Education. - Laura Cesaro; Andrea Franceschini; Silvana Badaloni; Emanuele Menegatti; Antonio Rodà (BEWARE@AI*IA, 2024)

Learn to Play: Lessons Learned Developing Video Games for Entertainment and Education. - Andrea Franceschini; Antonio Rodà (CoG, 2024)

Unexpected fault activation in underground gas storage. Part II: Definition of safe operational bandwidths. - Selena Baldan; Massimiliano Ferronato; Andrea Franceschini; Carlo Janna; Claudia Zoccarato; Matteo Frigo; Giovanni Isotton; Cristiano Collettini; Chiara Deangeli; Vera Rocca; Francesca Verga; Pietro Teatini (CoRR, 2024)

GEOS: A performance portable multi-physics simulation framework for subsurface applications. - Randolph R. Settgast; Ryan M. Aronson; Julien R. Besset; Andrea Borio; Quan M. Bui; Thomas J. Byer; Nicola Castelletto; Aurélien Citrain; Benjamin C. Corbett; James Corbett; Philippe Cordier; Matthias A. Cremon; et al. (J. Open Source Softw., 2024)

GEOS: A performance portable multi-physics simulation framework for subsurface applications. - Randolph Richard Settgast; Benjamin Curtice Corbett; Sergey Klevtsov; François P. Hamon; Christopher S. Sherman; Matteo Cusini; Thomas Gazzola; William R. Tobin; Joshua A. White; Nicola Castelletto; Andrea Borio; Andrea Franceschini; et al. (Zenodo, 2024)

GEOSX. - Randolph Richard Settgast; Benjamin Curtice Corbett; Sergey Klevtsov; François P. Hamon; Christopher S. Sherman; Matteo Cusini; Thomas Gazzola; William R. Tobin; Joshua A. White; Nicola Castelletto; Andrea Borio; Andrea Franceschini; et al. (Zenodo, 2024)

A novel mortar method integration using radial basis functions. - Daniele Moretto; Andrea Franceschini; Massimiliano Ferronato (Comput. Math. Appl., 2025)

Nesting Approximate Inverses for Improved Preconditioning and Algebraic Multigrid Smoothing. - Carlo Janna; Andrea Franceschini (SIAM J. Matrix Anal. Appl., 2025)