Reconstructing transcription factor activities in hierarchical transcription network motifs. - Andrea Ocone; Guido Sanguinetti (Bioinform., 2011)

A subsystems approach for parameter estimation of ODE models of hybrid systems - Anastasis Georgoulas; Allan Clark; Andrea Ocone; Stephen Gilmore; Guido Sanguinetti (HSB, 2012)

Hybrid regulatory models: a statistically tractable approach to model regulatory network dynamics. - Andrea Ocone; Andrew J. Millar; Guido Sanguinetti (Bioinform., 2013)

A stochastic hybrid model of a biological filter. - Andrea Ocone; Guido Sanguinetti (HAS, 2013)

Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data. - Andrea Ocone; Laleh Haghverdi; Nikola S. Müller; Fabian J. Theis (Bioinform., 2015)