Reverse engineering gene regulatory networks using approximate Bayesian computation. - Andrea Rau; Florence Jaffrézic; Jean-Louis Foulley; Rebecca W. Doerge (Stat. Comput., 2012)

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis. - Marie-Agnès Dillies; Andrea Rau; Julie Aubert; Christelle Hennequet-Antier; Marine Jeanmougin; Nicolas Servant; Céline Keime; Guillemette Marot; David Castel; Jordi Estelle; Gregory Guernec; Bernd Jagla; et al. (Briefings Bioinform., 2013)

Data-based filtering for replicated high-throughput transcriptome sequencing experiments. - Andrea Rau; Mélina Gallopin; Gilles Celeux; Florence Jaffrézic (Bioinform., 2013)

Joint estimation of causal effects from observational and intervention gene expression data. - Andrea Rau; Florence Jaffrézic; Grégory Nuel (BMC Syst. Biol., 2013)

Differential meta-analysis of RNA-seq data from multiple studies. - Andrea Rau; Guillemette Marot; Florence Jaffrézic (BMC Bioinform., 2014)

Co-expression analysis of high-throughput transcriptome sequencing data with Poisson mixture models. - Andrea Rau; Cathy Maugis-Rabusseau; Marie-Laure Martin-Magniette; Gilles Celeux (Bioinform., 2015)

Estimation d'effets causaux dans les réseaux de régulation génique. Vers la grande dimension. - Gilles Monneret; Florence Jaffrézic; Andrea Rau; Grégory Nuel (Rev. d'Intelligence Artif., 2015)

Transformation and model choice for RNA-seq co-expression analysis. - Andrea Rau; Cathy Maugis-Rabusseau (Briefings Bioinform., 2018)

Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis. - Guillem Rigaill; Sandrine Balzergue; Véronique Brunaud; Eddy Blondet; Andrea Rau; Odile Rogier; José Caius; Cathy Maugis-Rabusseau; Ludivine Taconnat; Sébastien Aubourg; Claire Lurin; Marie-Laure Martin-Magniette; et al. (Briefings Bioinform., 2018)

Exploring drivers of gene expression in the Cancer Genome Atlas. - Andrea Rau; Michael Flister; Hallgeir Rui; Paul L. Auer (Bioinform., 2019)

Accounting for overlapping annotations in genomic prediction models of complex traits. - Fanny Mollandin; Hélène Gilbert; Pascal Croiseau; Andrea Rau (BMC Bioinform., 2022)