A Natural Language Approach for the Design of Batch Operating Procedures. - Andreas A. Linninger (Informatica (Slovenia), 1998)

Modeling of Continuous-Discrete Processes. - Vishal Bahl; Andreas A. Linninger (HSCC, 2001)

Optimal waste reduction and investment planning under uncertainty. - Aninda Chakraborty; Andres Malcolm; Richard D. Colberg; Andreas A. Linninger (Comput. Chem. Eng., 2004)

Pulsatile cerebrospinal fluid dynamics in the human brain. - Andreas A. Linninger; Cristian Tsakiris; David C. Zhu; Michalis Xenos; Peter Roycewicz; Zachary Danziger; Richard D. Penn (IEEE Trans. Biomed. Eng., 2005)

Cerebrospinal Fluid Flow in the Normal and Hydrocephalic Human Brain. - Andreas A. Linninger; Michalis Xenos; David C. Zhu; Mahadevabharath R. Somayaji; Srinivasa Kondapalli; Richard D. Penn (IEEE Trans. Biomed. Eng., 2007)

Systematic design of drug delivery therapies. - Mahadevabharath R. Somayaji; Michalis Xenos; Libin Zhang; Megan Mekarski; Andreas A. Linninger (Comput. Chem. Eng., 2008)

Rigorous Mathematical Modeling Techniques for Optimal Delivery of Macromolecules to the Brain. - Andreas A. Linninger; Mahadevabharath R. Somayaji; Libin Zhang; adhu Smitha Hariharan; Richard D. Penn (IEEE Trans. Biomed. Eng., 2008)

Industry-wide energy saving by complex separation networks. - Andreas A. Linninger (Comput. Chem. Eng., 2009)

A hybrid sequential niche algorithm for optimal engineering design with solution multiplicity. - Jeonghwa Moon; Andreas A. Linninger (Comput. Chem. Eng., 2009)

Preface. - Andreas A. Linninger; Mahmoud M. El-Halwagi (Comput. Chem. Eng., 2010)

Design and optimization of energy efficient complex separation networks. - Gerardo J. Ruiz-Mercado; Seon B. Kim; Jeonghwa Moon; Libin Zhang; Andreas A. Linninger (Comput. Chem. Eng., 2010)

Three-dimensional computational prediction of cerebrospinal fluid flow in the human brain. - Brian Sweetman; Michalis Xenos; Laura Zitella; Andreas A. Linninger (Comput. Biol. Medicine, 2011)

Integrated design and control under uncertainty: Embedded control optimization for plantwide processes. - Jeonghwa Moon; Seon B. Kim; Andreas A. Linninger (Comput. Chem. Eng., 2011)

Dynamic Brain Phantom for Intracranial Volume Measurements. - Sukhraaj S. Basati; Timothy J. Harris; Andreas A. Linninger (IEEE Trans. Biomed. Eng., 2011)

Methods for Determining Agent Concentration Profiles in Agarose Gel During Convection-Enhanced Delivery. - Nikhil Sindhwani; Oleksandr Ivanchenko; Eric Lueshen; Komal Prem; Andreas A. Linninger (IEEE Trans. Biomed. Eng., 2011)

Biomedical systems research - New perspectives opened by quantitative medical imaging. - Andreas A. Linninger (Comput. Chem. Eng., 2012)

First principles pharmacokinetic modeling: A quantitative study on Cyclosporin. - Andrej Mosat; Eric Lueshen; Martina Heitzig; Cierra Hall; Andreas A. Linninger; Gürkan Sin; Rafiqul Gani (Comput. Chem. Eng., 2013)

Quantitative Integration of Biological, Pharmacokinetic, and Medical Imaging Data for Organ-Wide Dose-Response Predictions. - Ying Hsu; Andreas A. Linninger (IEEE Trans. Biomed. Eng., 2013)

A computer-aided framework for development, identification and management of physiologically-based pharmacokinetic models. - Martina Heitzig; Andreas A. Linninger; Gürkan Sin; Rafiqul Gani (Comput. Chem. Eng., 2014)

Biosystems modeling and engineering. - Andreas A. Linninger; Ioannis P. Androulakis (Comput. Chem. Eng., 2014)

Computer simulations and in vivo convection-enhanced delivery of fluorescent nanoparticles demonstrate variable distribution geometry. - Eric Lueshen; Michael LaRiviere; Bakhtiar Yamini; Andreas A. Linninger (Comput. Chem. Eng., 2014)

Impedance Changes Indicate Proximal Ventriculoperitoneal Shunt Obstruction In Vitro. - Sukhraaj S. Basati; Kevin Tangen; Ying Hsu; Hanna Lin; David M. Frim; Andreas A. Linninger (IEEE Trans. Biomed. Eng., 2015)

Simulation-free estimation of reaction propensities in cellular reactions and gene signaling networks. - Kirti M. Yenkie; Urmila M. Diwekar; Andreas A. Linninger (Comput. Chem. Eng., 2016)

Large-scale subject-specific cerebral arterial tree modeling using automated parametric mesh generation for blood flow simulation. - Mahsa Ghaffari; Kevin Tangen; Ali Alaraj; Xinjian Du; Fady T. Charbel; Andreas A. Linninger (Comput. Biol. Medicine, 2017)

Gap-free segmentation of vascular networks with automatic image processing pipeline. - Chih-Yang Hsu; Mahsa Ghaffari; Ali Alaraj; Michael Flannery; Xiaohong Joe Zhou; Andreas A. Linninger (Comput. Biol. Medicine, 2017)

Validation of parametric mesh generation for subject-specific cerebroarterial trees using modified Hausdorff distance metrics. - Mahsa Ghaffari; Lea Sanchez; Guoren Xu; Ali Alaraj; Xiaohong Joe Zhou; Fady T. Charbel; Andreas A. Linninger (Comput. Biol. Medicine, 2018)

Simulations of blood as a suspension predicts a depth dependent hematocrit in the circulation throughout the cerebral cortex. - Grant Hartung; Claudia Vesel; Ryan Morley; Ali Alaraj; John G. Sled; David Kleinfeld; Andreas A. Linninger (PLoS Comput. Biol., 2018)

Cellular Obstruction Clearance in Proximal Ventricular Catheters Using Low-Voltage Joule Heating. - Abhay Sane; Kevin Tangen; David M. Frim; Meenesh R. Singh; Andreas A. Linninger (IEEE Trans. Biomed. Eng., 2018)

Mathematical synthesis of the cortical circulation for the whole mouse brain-part I. theory and image integration. - Andreas A. Linninger; Grant Hartung; Shoale Badr; Ryan Morley (Comput. Biol. Medicine, 2019)

In Vivo Intrathecal Tracer Dispersion in Cynomolgus Monkey Validates Wide Biodistribution Along Neuraxis. - Kevin Tangen; Ivan Nestorov; Ajay Verma; Jenna M. Sullivan; Robert W. Holt; Andreas A. Linninger (IEEE Trans. Biomed. Eng., 2020)

Voxelized simulation of cerebral oxygen perfusion elucidates hypoxia in aged mouse cortex. - Grant Hartung; Shoale Badr; Mohammad Moeini; Frédéric Lesage; David Kleinfeld; Ali Alaraj; Andreas A. Linninger (PLoS Comput. Biol., 2021)