Fine-tuning structural RNA alignments in the twilight zone. - Andreas Bremges; Stefanie Schirmer; Robert Giegerich (BMC Bioinform., 2010)

MeCorS: Metagenome-enabled error correction of single cell sequencing reads. - Andreas Bremges; Esther Singer; Tanja Woyke; Alexander Sczyrba (Bioinform., 2016)

Assembling the microbial dark matter - Andreas Bremges (2016)