PySpot: A Python based Framework for the Assessment of Laser-modified 3D Microstructures for Windows and Raspbian. - Hannah Janout; Bianca Buchegger; Andreas Haghofer; Dominic Hoeglinger; Jaroslaw Jacak; Stephan M. Winkler; Armin Hochreiner (BIOIMAGING, 2020)

Evolutionary optimization of image processing for cell detection in microscopy images. - Andreas Haghofer; Sebastian Dorl; Andre Oszwald; Johannes Breuss; Jaroslaw Jacak; Stephan M. Winkler (Soft Comput., 2020)

Using Heterogeneous Model Ensembles to Improve the Prediction of Yeast Contamination in Peppermint. - Stefan Anlauf; Andreas Haghofer; Karl Dirnberger; Stephan M. Winkler (ISM, 2021)

Automated Data Adaptation for the Segmentation of Blood Vessels. - Andreas Haghofer; Thomas Ebner; Philipp Kainz; Michael Weißensteiner; Nassim Ghaffari-Tabrizi-Wizsy; Isra Hatab; Josef Scharinger; Stephan Winkler 001 (BIOSTEC (Selected Papers), 2022)

Analysis of Extracellular Vesicle Data on Fluorescence and Atomic Force Microscopy Images. - Hannah Janout; Jonas Schurr; Andreas Haghofer; Fabian Hauser; Jaroslaw Jacak; Stephan M. Winkler (BIOSTEC (Selected Papers), 2022)

Automated Segmentation of Patterned Cells in Micropatterning Microscopy Images. - Jonas Schurr; Andreas Haghofer; Peter Lanzerstorfer; Stephan M. Winkler (BIOSTEC (Selected Papers), 2022)

Identification of Surrogate Models for the Prediction of Degrees of Freedom within a Tolerance Chain. - Hannah Janout; Thomas Paier; Carina Ringelhahn; Michael Heckmann; Andreas Haghofer; Gabriel Kronberger; Stephan Winkler 001 (ISM, 2022)

In Vitro Quantification of Cellular Spheroids in Patterned Petri Dishes. - Jonas Schurr; Andreas Haghofer; Marian Fürsatz; Hannah Janout; Sylvia Nürnberger; Stephan Winkler 001 (BIOIMAGING, 2023)

Nuclear Morphometry using a Deep Learning-based Algorithm has Prognostic Relevance for Canine Cutaneous Mast Cell Tumors. - Andreas Haghofer; Eda Parlak; Alexander Bartel; Taryn A. Donovan; Charles-Antoine Assenmacher; Pompei Bolfa; Michael J. Dark; Andrea Fuchs-Baumgartinger; Andrea Klang; Kathrin Jäger; Robert Klopfleisch; Sophie Merz; et al. (CoRR, 2023)

Analysis of Fluorescence Images of C. elegans. - Jonas Schurr; Georg Sandner; Andreas Haghofer; Kerstin Hangweirer; Josef Scharinger; Stephan Winkler 001 (EUROCAST (2), 2024)

Abstract: Nuclear Pleomorphism in Canine Cutaneous Mast Cell Tumors. - Andreas Haghofer; Eda Parlak; Alexander Bartel; Taryn A. Donovan; Charles-Antoine Assenmacher; Pompei Bolfa; Michael J. Dark; Andrea Fuchs-Baumgartinger; Andrea Klang; Kathrin Jäger; Robert Klopfleisch; Sophie Merz; et al. (Bildverarbeitung für die Medizin, 2025)