Modular modeling correlates with functional promoter diversification of human MHC class I promoters although nucleotide sequence conservation is not correlated. - Thomas Werner; Andreas Klingenhoff; Kornelie Frech; Kerstin Quandt (German Conference on Bioinformatics, 1998)

Functional promoter modules can be detected by formal models independent of overall nucleotide sequence similarity. - Andreas Klingenhoff; Kornelie Frech; Kerstin Quandt; Thomas Werner (Bioinform., 1999)

A New Tool for the in Silico Prediction of Matrix Attachment Regions in Large Genomic Sequences. - Matthias Frisch; Kornelie Frech; Andreas Klingenhoff; Kerstin Quandt; Ines Liebich; Thomas Werner (German Conference on Bioinformatics, 2000)

Regulatory modules shared within gene classes as well as across gene classes can be detected by the same in silico approach. - Andreas Klingenhoff; Kornelie Frech; Thomas Werner (Silico Biol., 2000)

MatInspector and beyond: promoter analysis based on transcription factor binding sites. - K. Cartharius; Kornelie Frech; Korbinian Grote; Bernward Klocke; Manuela Haltmeier; Andreas Klingenhoff; Matthias Frisch; M. Bayerlein; Thomas Werner (Bioinform., 2005)