ProSpect: An R Package for Analyzing SELDI Measurements Identifying Protein Biomarkers. - Andreas Quandt; Alexander Ploner; Chuen Seng Tan; Janne Lehtiö; Yudi Pawitan (CompLife, 2005)

Finding regions of significance in SELDI measurements for identifying protein biomarkers. - Chuen Seng Tan; Alexander Ploner; Andreas Quandt; Janne Lehtiö; Yudi Pawitan (Bioinform., 2006)

Grid-based Analysis of Tandem Mass Spectrometry Data in Clinical Proteomics. - Andreas Quandt; Patricia Hernandez; Peter Kunzst; Cesare Pautasso; Marc Tuloup; Céline Hernandez; Ron D. Appel (HealthGrid, 2007)

swissPIT: a novel approach for pipelined analysis of mass spectrometry data. - Andreas Quandt; Patricia Hernandez; Alexandre Masselot; Céline Hernandez; Sergio Maffioletti; Cesare Pautasso; Ron D. Appel; Frédérique Lisacek (Bioinform., 2008)

openBIS: a flexible framework for managing and analyzing complex data in biology research. - Angela Bauch; Izabela Adamczyk; Piotr Buczek; Franz-Josef Elmer; Kaloyan Enimanev; Pawel Glyzewski; Manuel Kohler; Tomasz Pylak; Andreas Quandt; Chandrasekhar Ramakrishnan; Christian Beisel; Lars Malmström; et al. (BMC Bioinform., 2011)

Improving the Swiss Grid Proteomics Portal: Requirements and new Features based on Experience and Usability Considerations. - Peter Z. Kunszt; Lorenz Blum; Béla Hullár; Emanuel Schmid; Adam Srebniak; Witold Wolski; Bernd Rinn; Franz-Josef Elmer; Chandrasekhar Ramakrishnan; Andreas Quandt; Lars Malmström (IWSG, 2013)

iPortal: the swiss grid proteomics portal: Requirements and new features based on experience and usability considerations. - Peter Z. Kunszt; Lorenz Blum; Béla Hullár; Emanuel Schmid; Adam Srebniak; Witold Wolski; Bernd Rinn; Franz-Josef Elmer; Chandrasekhar Ramakrishnan; Andreas Quandt; Lars Malmström (Concurr. Comput. Pract. Exp., 2015)