Evaluation of high-throughput isomiR identification tools: illuminating the early isomiRome of Tribolium castaneum. - Daniel Amsel; Andreas Vilcinskas; André Billion (BMC Bioinform., 2017)

microPIECE - microRNA pipeline enhanced by CLIP experiments. - Daniel Amsel; André Billion; Andreas Vilcinskas; Frank Förster (J. Open Source Softw., 2018)

Elucidation of the MicroRNA Transcriptome in Western Corn Rootworm Reveals Its Dynamic and Evolutionary Complexity. - Xiaozeng Yang; Elane Fishilevich; Marcelo A. German; Premchand Gandra; Robert E. McEwan; André Billion; Eileen Knorr; Andreas Vilcinskas; Kenneth E. Narva (Genom. Proteom. Bioinform., 2021)